RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 NPTX1Q15818 432 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 SNRNP35Q16560 246 aaKnown RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 C1orf189Q5VU69 101 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 PKN3Q6P5Z2 889 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 CHERPQ8IWX8 916 aaKnown RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 SLC15A3Q8IY34 581 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 FIBCD1Q8N539 461 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 ANKRD52Q8NB46 1076 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 COQ8AQ8NI60 647 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 TFB1MQ8WVM0 346 aaKnown RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 TMIGD2Q96BF3 282 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 FAM136AQ96C01 138 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 MAGEB10Q96LZ2 347 aaPredicted RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 MIPEPQ99797 713 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 BCL7BQ9BQE9 202 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 C12orf65Q9H3J6 166 aaKnown RBP4.44□□□□□ -1.7
CDH8-205ENST00000577730 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.44□□□□□ -1.7
CDH8-205ENST00000577730 TAS2R7Q9NYW3 318 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 SH3BP4Q9P0V3 963 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 FAM205AQ6ZU69 1335 aa4.44□□□□□ -1.7
CDH8-205ENST00000577730 USP17L3A6NCW0 530 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 USP17L4A6NCW7 530 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 CLCA1A8K7I4 914 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 GSG1L2A8MUP6 293 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 H3BN98 237 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 PGRMC2O15173 223 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 KHDRBS3O75525 346 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 ANXA3P12429 323 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 AOC1P19801 751 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 OR3A3P47888 321 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 IDH3AP50213 366 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 TPMTP51580 245 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 NDST2P52849 883 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ARFIP1P53367 373 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SLC16A1P53985 500 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SSTP61278 116 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 DBPQ10586 325 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 PSMD5Q16401 504 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 EIF2S3LQ2VIR3 472 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 BRMS1LQ5PSV4 323 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 OLFML2AQ68BL7 652 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 MSANTD1Q6ZTZ1 278 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 OTOP3Q7RTS5 596 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 USP17L1Q7RTZ2 530 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 PIWIL4Q7Z3Z4 852 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 TMEM132CQ8N3T6 1108 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 TMEM199Q8N511 208 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ZNF557Q8N988 423 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 KAT2AQ92830 837 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ALPK1Q96QP1 1244 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 NYXQ9GZU5 481 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SLITRK2Q9H156 845 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 RPF2Q9H7B2 306 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 SIAEQ9HAT2 523 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SCPEP1Q9HB40 452 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 KRCC1Q9NPI7 259 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 CDC14AQ9UNH5 594 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 LYVE1Q9Y5Y7 322 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 FAM95CA0A1B0GW59 222 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 TCRBV9S1A1TA0A576 114 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 EEF2KO00418 725 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 IFRD1O00458 451 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 SLC30A4O14863 429 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 TBX3O15119 743 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 OIP5O43482 229 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 RP2O75695 350 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 CRTAPO75718 401 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 OAS1P00973 400 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 ITGAVP06756 1048 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 CYP2C8P10632 490 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 OGNP20774 298 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 PSMA3P25788 255 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 HTR2AP28223 471 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 BTDP43251 543 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 NAGLUP54802 743 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 BTN1A1Q13410 526 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 RHEBQ15382 184 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SHROOM1Q2M3G4 852 aaPredicted RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 ARHGAP15Q53QZ3 475 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 TCEAL6Q6IPX3 200 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 NEPROQ6NW34 567 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SLC9A9Q8IVB4 645 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 UBQLNLQ8IYU4 475 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 METTL6Q8TCB7 284 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ADAMTS16Q8TE57 1224 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 MAFIPQ8WZ33 124 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SEMA4DQ92854 862 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SLC39A13Q96H72 371 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 C12orf66Q96MD2 445 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 FAM129BQ96TA1 746 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 LPIN3Q9BQK8 851 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 METTL8Q9H825 291 aaKnown RBP4.43□□□□□ -1.7
CDH8-205ENST00000577730 RASSF1Q9NS23 344 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 FETUBQ9UGM5 382 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ATP7BP35670 1465 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 CC2D2AQ9P2K1 1620 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 SYNDIG1LA6NDD5 238 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 REM1O75628 298 aa4.43□□□□□ -1.7
CDH8-205ENST00000577730 ATP5F1P24539 256 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms