RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MLLT10P55197 1068 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 KIAA1024LP59773 190 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 DEFB109BQ30KR1 87 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 ANKS6Q68DC2 871 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 DPY19L2P1Q6NXN4 242 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 ERAP2Q6P179 960 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 NRSN1Q8IZ57 195 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 PYROXD2Q8N2H3 581 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 JOSD2Q8TAC2 188 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 GPT2Q8TD30 523 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 HCAR2Q8TDS4 363 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 CASKIN2Q8WXE0 1202 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 MIB2Q96AX9 1013 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 TBC1D31Q96DN5 1066 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 CATSPER2Q96P56 530 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 CTRCQ99895 268 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 RETREG1Q9H6L5 497 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 CARS2Q9HA77 564 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 ST14Q9Y5Y6 855 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 ICE1Q9Y2F5 2266 aa10.15□□□□□ -0.78
NPLOC4-220ENST00000576940 TSPAN11A1L157 253 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 EFCAB7A8K855 629 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 RASA4BC9J798 803 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 K7EM74 188 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 RASA4O43374 803 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 FGFR1OPO95684 399 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 CCNB1P14635 433 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 NR1D1P20393 614 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 KELP23276 732 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 OAS2P29728 719 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 CSTF2P33240 577 aaKnown RBP eCLIP10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 MMP12P39900 470 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 RGRP47804 291 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 BPIFB4P59827 614 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 RALGDSQ12967 914 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 ATP1A1-AS1Q5TC04 95 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 PNCKQ6P2M8 343 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 C16orf46Q6P387 395 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 LIPIQ6XZB0 460 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 ARCQ7LC44 396 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 TIPARPQ7Z3E1 657 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 ZNF438Q7Z4V0 828 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 FAM129CQ86XR2 697 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 DNAAF5Q86Y56 855 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 ELOA2Q8IYF1 753 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 AGBL5Q8NDL9 886 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 KIAA1524Q8TCG1 905 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 SLC45A3Q96JT2 553 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 SPRY4Q9C004 299 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 TAAR2Q9P1P5 351 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 PILRAQ9UKJ1 303 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 ATP8A1Q9Y2Q0 1164 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 PLEKHM1Q9Y4G2 1056 aa10.14□□□□□ -0.79
NPLOC4-220ENST00000576940 TRBV23OR9-2A0A075B6M9 112 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 PRSS38A1L453 326 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 GTPBP10A4D1E9 387 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 CFAP69A5D8W1 941 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 A8MU76 341 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 J3KR12 359 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 CEACAM5P06731 702 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 MMEP08473 750 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 KRT7P08729 469 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 HOXC4P09017 264 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 THRAP10827 490 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 EPHB2P29323 1055 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 SDC4P31431 198 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 STAT1P42224 750 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 GNPDA1P46926 289 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 POLD2P49005 469 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 HDAC4P56524 1084 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 BIRC2Q13490 618 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 TRA2AQ13595 282 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 RAPGEF1Q13905 1077 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 NR1D2Q14995 579 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 DCAF12Q5T6F0 453 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 NAA35Q5VZE5 725 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 BRAT1Q6PJG6 821 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 SLC30A9Q6PML9 568 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 NOP9Q86U38 636 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 ZNF761Q86XN6 746 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 NAGSQ8N159 534 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 RTL3Q8N8U3 475 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 OR4D9Q8NGE8 314 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 APOBEC4Q8WW27 367 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 CENPIQ92674 756 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 RTP4Q96DX8 246 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 ZNF641Q96N77 438 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 DDA1Q9BW61 102 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 GSDMCQ9BYG8 508 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 ASPSCR1Q9BZE9 553 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 GPN2Q9H9Y4 310 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 UBA2Q9UBT2 640 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 MYO9AB2RTY4 2548 aa10.13□□□□□ -0.79
NPLOC4-220ENST00000576940 IGHV1OR21-1A0A087WYE8 117 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 C2CD4BA6NLJ0 364 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 B4E171 279 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms