RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ALG11Q2TAA5 492 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 CAPRIN2Q6IMN6 1127 aaKnown RBP5.34□□□□□ -1.55
NUP88-213ENST00000576862 RHBDF2Q6PJF5 856 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 QSOX2Q6ZRP7 698 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 FOXRED2Q8IWF2 684 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 ZBTB2Q8N680 514 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 NAXEQ8NCW5 288 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 HUS1BQ8NHY5 278 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 RTP4Q96DX8 246 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 PPM1MQ96MI6 270 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 ZNF570Q96NI8 536 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 MMTAG2Q9BU76 263 aaKnown RBP5.34□□□□□ -1.55
NUP88-213ENST00000576862 BPIFA1Q9NP55 256 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 NOX4Q9NPH5 578 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 SLCO3A1Q9UIG8 710 aa5.34□□□□□ -1.55
NUP88-213ENST00000576862 CYC1P08574 325 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 CD58P19256 250 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 ICAM3P32942 547 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 EIF2S3P41091 472 aaKnown RBP5.33□□□□□ -1.56
NUP88-213ENST00000576862 NEXNQ0ZGT2 675 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 G3BP1Q13283 466 aaKnown RBP eCLIP5.33□□□□□ -1.56
NUP88-213ENST00000576862 NEDD9Q14511 834 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 PPP6R3Q5H9R7 873 aaPredicted RBP5.33□□□□□ -1.56
NUP88-213ENST00000576862 LILRB1Q8NHL6 650 aaPredicted RBP5.33□□□□□ -1.56
NUP88-213ENST00000576862 CREB3L4Q8TEY5 395 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 SAAL1Q96ER3 474 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 SLITRK1Q96PX8 696 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 CSF3RQ99062 836 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 HAUS8Q9BT25 410 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 SPRY4Q9C004 299 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 INTS6Q9UL03 887 aaKnown RBP5.33□□□□□ -1.56
NUP88-213ENST00000576862 PCDHGB1Q9Y5G3 927 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 NFS1Q9Y697 457 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 CAPN7Q9Y6W3 813 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 SYNJ1O43426 1573 aa5.33□□□□□ -1.56
NUP88-213ENST00000576862 TMEM202A6NGA9 273 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 BTBD18B2RXH4 712 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE7O76087 117 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 AFPP02771 609 aaKnown RBP5.32□□□□□ -1.56
NUP88-213ENST00000576862 HOXB5P09067 269 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE12FP0CL80 117 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE12GP0CL81 117 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE12IP0CL82 117 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 TGFB3P10600 412 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 UBL4AP11441 157 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 DLG1Q12959 904 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE1Q13065 139 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GAGE4Q13068 117 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 GSTA3Q16772 222 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 IZUMO4Q1ZYL8 232 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 AMZ1Q400G9 498 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 JAKMIP3Q5VZ66 844 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 PLEKHA7Q6IQ23 1121 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 TMED8Q6PL24 325 aaPredicted RBP5.32□□□□□ -1.56
NUP88-213ENST00000576862 R3HCC1LQ7Z5L2 792 aaKnown RBP5.32□□□□□ -1.56
NUP88-213ENST00000576862 PCYOX1LQ8NBM8 494 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 DDX31Q9H8H2 851 aaKnown RBP5.32□□□□□ -1.56
NUP88-213ENST00000576862 TAS2R10Q9NYW0 307 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 FBXO9Q9UK97 447 aaPredicted RBP5.32□□□□□ -1.56
NUP88-213ENST00000576862 PROCRQ9UNN8 238 aa5.32□□□□□ -1.56
NUP88-213ENST00000576862 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 NPIPB15A6NHN6 443 aaPredicted RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 PLRG1O43660 514 aaKnown RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 G6PDP11413 515 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 CDAP32320 146 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 RGS2P41220 211 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 EIF3BP55884 814 aaKnown RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 FGFBP1Q14512 234 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 SF3B4Q15427 424 aaKnown RBP eCLIP5.31□□□□□ -1.561e-7■■■■□ 22.4
NUP88-213ENST00000576862 KIF19Q2TAC6 998 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 COL28A1Q2UY09 1125 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 EIF2S3LQ2VIR3 472 aaKnown RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 HAPLN4Q86UW8 402 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 DCP1BQ8IZD4 617 aaKnown RBP5.31□□□□□ -1.56
NUP88-213ENST00000576862 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 METTL6Q8TCB7 284 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 RFFLQ8WZ73 363 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 RND1Q92730 232 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 SLC41A2Q96JW4 573 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 FAM110AQ9BQ89 295 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 C1QTNF4Q9BXJ3 329 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 SLC6A13Q9NSD5 602 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 TINAGQ9UJW2 476 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 RCOR1Q9UKL0 485 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 MKLN1Q9UL63 735 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 SNX9Q9Y5X1 595 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 RUSC2Q8N2Y8 1516 aa5.31□□□□□ -1.56
NUP88-213ENST00000576862 UTYO14607 1347 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 A0A1W2PPH5 198 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 LRRC53A6NM62 1247 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 SMTNL1A8MU46 457 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 SOCS6O14544 535 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 KDM4BO94953 1096 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 CLDN14O95500 239 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 FTCDO95954 541 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 MAOAP21397 527 aa5.3□□□□□ -1.56
NUP88-213ENST00000576862 STX2P32856 288 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms