RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ITGB6P18564 788 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 TALDO1P37837 337 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 POLD2P49005 469 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ACADVLP49748 655 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PTBP2Q9UKA9 531 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ADAM30Q9UKF2 790 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 IKZF3Q9UKT9 509 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 COPG1Q9Y678 874 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SESN1Q9Y6P5 492 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 WBP4O75554 376 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ANGPTL1O95841 491 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ITGALP20701 1170 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 HALP42357 657 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 MPP1Q00013 466 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 TAB1Q15750 504 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 MOGQ16653 247 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 INTS11Q5TA45 600 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF57Q68EA5 555 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 P2RY8Q86VZ1 359 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ST13P5Q8NFI4 369 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC47A1Q96FL8 570 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SEPT5Q99719 369 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 HDHD2Q9H0R4 259 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 DTLQ9NZJ0 730 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 KLQ9UEF7 1012 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF221Q9UK13 617 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 MYH7P12883 1935 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SNED1Q8TER0 1413 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CCDC182A6NF36 153 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 FGFR1P11362 822 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 MZF1P28698 734 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 TM4SF1P30408 202 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CD86P42081 329 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 OXCT1P55809 520 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 IRF9Q00978 393 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CA9Q16790 459 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZFP69Q49AA0 526 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 KIAA0319LQ8IZA0 1049 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAR1Q8WVX9 515 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 REXO5Q96IC2 774 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 THP07101 528 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 C4BPBP20851 252 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 ADRA1BP35368 520 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SIM2Q14190 667 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 TIFABQ6ZNK6 161 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 LPCAT1Q8NF37 534 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 PPP3R2Q96LZ3 170 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CNTN6Q9UQ52 1028 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SAMHD1Q9Y3Z3 626 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 NDUFS2O75306 463 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RECQL4O94761 1208 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 NCK1P16333 377 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CYP2C18P33260 490 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CHI3L1P36222 383 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 YAP1P46937 504 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RXRGP48443 463 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 IKBKEQ14164 716 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 KRT33BQ14525 404 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CLEC4MQ9H2X3 399 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 IFT80Q9P2H3 777 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 GNG14A0A1W2PPG7 69 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 E7ESA3 106 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 FTH1P02794 183 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms