RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 KRT80Q6KB66 452 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 BTLAQ7Z6A9 289 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 LSMEM2Q8N112 164 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 OR13C4Q8NGS5 318 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 FNDC8Q8TC99 324 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 AUTS2Q8WXX7 1259 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 CPNE1Q99829 537 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 FAF1Q9UNN5 650 aaPredicted RBP8.56□□□□□ -1.04
RPAIN-215ENST00000575112 PCDHB12Q9Y5F1 795 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 CORINQ9Y5Q5 1042 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 TRPV2Q9Y5S1 764 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ARHGEF37A1IGU5 675 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ZNF839A8K0R7 811 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 PIRO00625 290 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 NDUFS3O75489 264 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 DDHD2O94830 711 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 LINC00032P0C843 101 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 YWHAQP27348 245 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 CCND3P30281 292 aaPredicted RBP8.56□□□□□ -1.04
RPAIN-215ENST00000575112 CD151P48509 253 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 KCNQ1P51787 676 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 HTRA3P83110 453 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 IKBKEQ14164 716 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 FAM110CQ1W6H9 321 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ALFQ53S48 1182 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ARMC12Q5T9G4 340 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 GRTP1Q5TC63 336 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 TPGS1Q6ZTW0 290 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 DENND1CQ8IV53 801 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 CNTD1Q8N815 330 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ZMIZ2Q8NF64 920 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 HMCESQ96FZ2 354 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 SCLYQ96I15 445 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 GLT1D1Q96MS3 346 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 MLPHQ9BV36 600 aaPredicted RBP8.56□□□□□ -1.04
RPAIN-215ENST00000575112 MID1IP1Q9NPA3 183 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 MKS1Q9NXB0 559 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 MARCH2Q9P0N8 246 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 FBXW11Q9UKB1 542 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ANGPTL3Q9Y5C1 460 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ARL5AQ9Y689 179 aa8.56□□□□□ -1.04
RPAIN-215ENST00000575112 ASCC3Q8N3C0 2202 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 H0Y626 953 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 DAB1O75553 588 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TRIM16O95361 564 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 HLA-DQB2P05538 268 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 HAPLN1P10915 354 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RPS24P62847 133 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 NRG1Q02297 640 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TNK2Q07912 1038 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 BNIP3Q12983 259 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 POLD3Q15054 466 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 ZDHHC17Q8IUH5 632 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RAVER1Q8IY67 606 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CRYBG2Q8N1P7 616 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CARNMT1Q8N4J0 409 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 HEXDCQ8WVB3 486 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TANKQ92844 425 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 C12orf43Q96C57 262 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RTP4Q96DX8 246 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 FBXL20Q96IG2 436 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 MTG1Q9BT17 334 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CCDC28BQ9BUN5 200 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 PAIP1Q9H074 479 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CATSPERBQ9H7T0 1116 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RGS18Q9NS28 235 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 C6orf203Q9P0P8 240 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 ZFC3H1O60293 1989 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RGSL1A5PLK6 1076 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TBKBP1A7MCY6 615 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 PPP6CO00743 305 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TIMM44O43615 452 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 SH3BP5O60239 455 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 MGEA5O60502 916 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 TSHRP16473 764 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 SLC1A2P43004 574 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CLCN2P51788 898 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 PTK2BQ14289 1009 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 UBXN11Q5T124 520 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 ZNF554Q86TJ5 538 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 CEP97Q8IW35 865 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 SH3RF2Q8TEC5 729 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 NPY6RQ99463 290 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 DUS2Q9NX74 493 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RAB26Q9ULW5 256 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RBMX2Q9Y388 322 aaKnown RBP8.55□□□□□ -1.04
RPAIN-215ENST00000575112 BRWD3Q6RI45 1802 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 IQCF5A8MTL0 148 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 MATN2O00339 956 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 RAMP2O60895 175 aa8.55□□□□□ -1.04
RPAIN-215ENST00000575112 KCNH1O95259 989 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms