RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 TSPAN11A1L157 253 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TOR1BO14657 336 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 BUB1BO60566 1050 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ERLIN1O75477 346 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ANXA6P08133 673 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 GIMD1P0DJR0 217 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TCF4P15884 667 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TCP1P17987 556 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 AMPD1P23109 780 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 IL1R2P27930 398 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 CSNK1DP48730 415 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 HCAR3P49019 387 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 BLKP51451 505 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 AP1S1P61966 158 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 PPARDQ03181 441 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 NR0B2Q15466 257 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 BOLA3Q53S33 107 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ZFYVE27Q5T4F4 411 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 AFMIDQ63HM1 303 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 CRTC1Q6UUV9 634 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 RD3Q7Z3Z2 195 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 HID1Q8IV36 788 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TP53INP2Q8IXH6 220 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 FAM181AQ8N9Y4 354 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ATL2Q8NHH9 583 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 MAPK15Q8TD08 544 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 RFFLQ8WZ73 363 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 VOPP1Q96AW1 172 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 CALR3Q96L12 384 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 DEPDC7Q96QD5 511 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 LRRC61Q9BV99 259 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 NRSN2Q9GZP1 204 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TCEAL2Q9H3H9 227 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ETNK2Q9NVF9 386 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 TRIM10Q9UDY6 481 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 KLQ9UEF7 1012 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 HYOU1Q9Y4L1 999 aa9.72□□□□□ -0.85
NPLOC4-216ENST00000574344 ARHGEF17Q96PE2 2063 aaPredicted RBP9.71□□□□□ -0.85
NPLOC4-216ENST00000574344 A0A087X0T9 212 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 TMEM110-MUSTN1A8MSY1 372 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 BTNL10A8MVZ5 291 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 A8MX80 341 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 MYO1FO00160 1098 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 MUSKO15146 869 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 OPA1O60313 960 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 BRINP1O60477 761 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 CPP00450 1065 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 GP1BAP07359 652 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ALPIP09923 528 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 FAM228BP0C875 321 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 RARAP10276 462 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 TSHRP16473 764 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 NFKBIAP25963 317 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ABCG1P45844 678 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 RPIAP49247 311 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 CDH6P55285 790 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 SLC10A7Q0GE19 358 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 INPP5AQ14642 412 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 NFATC4Q14934 902 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ACOX1Q15067 660 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ELOCQ15369 112 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 HADHQ16836 314 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ERCC6LQ2NKX8 1250 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 WSCD2Q2TBF2 565 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 DENND2CQ68D51 928 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ESRP1Q6NXG1 681 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 GUSBP11Q6P575 273 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ALKBH5Q6P6C2 394 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ENPP7Q6UWV6 458 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 EFL1Q7Z2Z2 1120 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 POLNQ7Z5Q5 900 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ZSWIM9Q86XI8 627 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ZNF564Q8TBZ8 553 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 TEKT4Q8WW24 435 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 SCG3Q8WXD2 468 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 TSACCQ96A04 125 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 WDR92Q96MX6 357 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 ZNF599Q96NL3 588 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 CSPG4P5Q96PW8 444 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 PSKH2Q96QS6 385 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 APOOQ9BUR5 198 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 PCDH18Q9HCL0 1135 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 SIRPGQ9P1W8 387 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 CTTNBP2NLQ9P2B4 639 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 MOSPD1Q9UJG1 213 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 SALL4Q9UJQ4 1053 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 INTUQ9ULD6 942 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 OR1A2Q9Y585 309 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
NPLOC4-216ENST00000574344 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GOLGA6CA6NDK9 693 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 GOLGA6BA6NDN3 693 aa9.7□□□□□ -0.86
NPLOC4-216ENST00000574344 LMO7DNF2Z398 122 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms