RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 PAK5Q9P286 719 aa33.21■■■□□ 2.91
CTDNEP1-209ENST00000574205 PHF2O75151 1096 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 HEXIM1O94992 359 aaKnown RBP33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 ZNF806P0C7X5 589 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 AKT2P31751 481 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 PAFAH1B1P43034 410 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 ARHGEF7Q14155 803 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 PTPRRQ15256 657 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 CNGA3Q16281 694 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 TTC27Q6P3X3 843 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 SLC23A3Q6PIS1 610 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 DCLK2Q8N568 766 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 GLIS1Q8NBF1 620 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 SLC6A18Q96N87 628 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 LENG8Q96PV6 779 aaPredicted RBP33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 SMIM14Q96QK8 99 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 C1QTNF7Q9BXJ2 289 aa33.2■■■□□ 2.91
CTDNEP1-209ENST00000574205 ZNF30P17039 623 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 HLA-DPA1P20036 260 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 AGERQ15109 404 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 SLC1A5Q15758 541 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 TRIM61Q5EBN2 209 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 CCDC137Q6PK04 289 aaKnown RBP33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 TMEM145Q8NBT3 493 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 DENND6BQ8NEG7 585 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 LRRC45Q96CN5 670 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 SEMA4GQ9NTN9 838 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 COQ6Q9Y2Z9 468 aa33.19■■■□□ 2.9
CTDNEP1-209ENST00000574205 PSMD11O00231 422 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 LZTS3O60299 673 aaPredicted RBP33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 ATXN1LP0C7T5 689 aaKnown RBP33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 ETS1P14921 441 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 COILP38432 576 aaPredicted RBP33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 FNTAP49354 379 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 LRRC66Q68CR7 880 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 CRTC1Q6UUV9 634 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 C4orf22Q6V702 233 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 TSPAN33Q86UF1 283 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 FZD3Q9NPG1 666 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 AASDHPPTQ9NRN7 309 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 PATE3B3GLJ2 98 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 KHNYNO15037 678 aaKnown RBP33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 TUBB4AP04350 444 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 CFIP05156 583 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 FDFT1P37268 417 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 STAT4Q14765 748 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 CSRP2Q16527 193 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 KCTD11Q693B1 232 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 PRUNE1Q86TP1 453 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 KLF6Q99612 283 aaPredicted RBP33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 FICDQ9BVA6 458 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 SMOC1Q9H4F8 434 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 MAGEE1Q9HCI5 957 aa33.18■■■□□ 2.9
CTDNEP1-209ENST00000574205 WNT9AO14904 365 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 CD38P28907 300 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 ADRA1AP35348 466 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 TEAD4Q15561 434 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 SIRPB2Q5JXA9 342 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 FAXCQ5TGI0 409 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 RANBP10Q6VN20 620 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 CBARPQ8N350 705 aaPredicted RBP33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 SRPK1Q96SB4 655 aaKnown RBP33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 MYOCQ99972 504 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 CAPN10Q9HC96 672 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 PARD6AQ9NPB6 346 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 FEZ2Q9UHY8 353 aaPredicted RBP33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 SLC6A14Q9UN76 642 aa33.17■■■□□ 2.9
CTDNEP1-209ENST00000574205 FGF1P05230 155 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 ZSCAN5DPP0CG00 497 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 TGM1P22735 817 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 CHRNA4P43681 627 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 CENPTQ96BT3 561 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 NUSAP1Q9BXS6 441 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 ETNK1Q9HBU6 452 aa33.16■■■□□ 2.9
CTDNEP1-209ENST00000574205 C1orf232A0A0U1RR37 186 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 KIF2AO00139 706 aaPredicted RBP33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 RAD51BO15315 384 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 PSMD3O43242 534 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 RECQL5O94762 991 aaPredicted RBP33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 AGTP01019 485 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 RPL22P35268 128 aaKnown RBP33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 ACOX1Q15067 660 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 TAB3Q8N5C8 712 aaPredicted RBP33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 SLC25A41Q8N5S1 370 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 GPR161Q8N6U8 529 aaKnown RBP33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 GRK7Q8WTQ7 553 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 COQ10AQ96MF6 247 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 LRRC40Q9H9A6 602 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 RAB6BQ9NRW1 208 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 KCTD5Q9NXV2 234 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 HS3ST3A1Q9Y663 406 aa33.15■■■□□ 2.9
CTDNEP1-209ENST00000574205 A0A0U1RQS6 177 aa33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 A0A1W2PR77 199 aa33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 ERI2A8K979 691 aaKnown RBP33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 FOXD2O60548 495 aaPredicted RBP33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 AP2A1O95782 977 aa33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 CSNK1EP49674 416 aaKnown RBP33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 PTSQ03393 145 aa33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 LRRC14Q15048 493 aa33.14■■■□□ 2.9
CTDNEP1-209ENST00000574205 CDKN3Q16667 212 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms