RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CES2O00748 559 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 TOR1BO14657 336 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ENC1O14682 589 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 FPGTO14772 594 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GIPC1O14908 333 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 VILLO15195 856 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 SPINT1O43278 529 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 LIASO43766 372 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 DFNA5O60443 496 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 OPHN1O60890 802 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ANXA9O76027 345 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 FGGP02679 453 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 PDHA1P08559 390 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ELFN1P0C7U0 828 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GOLGA6DP0CG33 693 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ENGP17813 658 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ITIH2P19823 946 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 CD68P34810 354 aaPredicted RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 CSNK1EP49674 416 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 LIG3P49916 1009 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GEMP55040 296 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GNG11P61952 73 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 CDK18Q07002 472 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 MPP3Q13368 585 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 AGERQ15109 404 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 CCNG2Q16589 344 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ANKRD20A2Q5SQ80 823 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ANKRD20A1Q5TYW2 823 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 ANKRD20A3Q5VUR7 823 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 LIPIQ6XZB0 460 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 DCP2Q8IU60 420 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 KLK6Q92876 244 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 SLC6A18Q96N87 628 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 SPATA13Q96N96 652 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 FAM118BQ9BPY3 351 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 WRAP53Q9BUR4 548 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 GBA3Q9H227 469 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 SLC32A1Q9H598 525 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 USP29Q9HBJ7 922 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GOLGA6AQ9NYA3 693 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 B4GALT6Q9UBX8 382 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 GGT7Q9UJ14 662 aa11.07□□□□□ -0.64
CHD3-216ENST00000573936 R3HDM2Q9Y2K5 976 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 AAR2Q9Y312 384 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 TNRC6BQ9UPQ9 1833 aaKnown RBP11.07□□□□□ -0.64
CHD3-216ENST00000573936 CEP192Q8TEP8 1941 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 A0A0J9YYE9 177 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 A0A1B0GVT2 93 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 A0A1W2PR77 199 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 A6NNZ2 444 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 ANKRD66B4E2M5 251 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 PRLP01236 227 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 EPOP01588 193 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 TRBC1P01850 177 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 PRKCGP05129 697 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 C6P13671 934 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 PRLRP16471 622 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 ZNF30P17039 623 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 TCP1P17987 556 aaKnown RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 NFKB1P19838 968 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 SPINK2P20155 84 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 CXCR5P32302 372 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 ACTN2P35609 894 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 FGL2Q14314 439 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 DRICH1Q6PGQ1 229 aaPredicted RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 RAVER1Q8IY67 606 aaKnown RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 RASGEF1CQ8N431 466 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 TMEM145Q8NBT3 493 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 LPCAT1Q8NF37 534 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 SPATA22Q8NHS9 363 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 MCCC1Q96RQ3 725 aaPredicted RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 OSBPL9Q96SU4 736 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 SCNM1Q9BWG6 230 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 C10orf88Q9H8K7 445 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 TTC7AQ9ULT0 858 aaPredicted RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 SNX12Q9UMY4 172 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 ZNF148Q9UQR1 794 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 DRG1Q9Y295 367 aaKnown RBP11.06□□□□□ -0.64
CHD3-216ENST00000573936 ANKRD6Q9Y2G4 727 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 SHROOM3Q8TF72 1996 aa11.06□□□□□ -0.64
CHD3-216ENST00000573936 PI4KAP42356 2102 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 LOC285095A0A1B0GVY8 99 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 CAPN8A6NHC0 703 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 ESPNB1AK53 854 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 TLR4O00206 839 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 LAMA5O15230 3695 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 PSMD3O43242 534 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 PMPCBO75439 489 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 GCATO75600 419 aa11.05□□□□□ -0.64
CHD3-216ENST00000573936 HEXIM1O94992 359 aaKnown RBP11.05□□□□□ -0.64
CHD3-216ENST00000573936 NDST3O95803 873 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms