RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 OSBPL9Q96SU4 736 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 KLF6Q99612 283 aaPredicted RBP9.14□□□□□ -0.95
NDE1-207ENST00000573203 ZNF670Q9BS34 389 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 SLC6A16Q9GZN6 736 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 TFR2Q9UP52 801 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 COQ6Q9Y2Z9 468 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 MSRB2Q9Y3D2 182 aa9.14□□□□□ -0.95
NDE1-207ENST00000573203 SPTY2D1-AS1A0A0U1RR47 76 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 C1QTNF9BB2RNN3 333 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 LZTS3O60299 673 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 PIAS2O75928 621 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 NEBLO76041 1014 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 PEX11BO96011 259 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 C1QTNF9P0C862 333 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 C6P13671 934 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 MCM3P25205 808 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 IGFALSP35858 605 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 MMP12P39900 470 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 MMP13P45452 471 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 LIG3P49916 1009 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 THOP1P52888 689 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 PFN3P60673 137 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 HNRNPKP61978 463 aaKnown RBP eCLIP9.13□□□□□ -0.953e-8■□□□□ 8.9
NDE1-207ENST00000573203 SEMG2Q02383 582 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 PDE1CQ14123 709 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 PTK2BQ14289 1009 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 FZD2Q14332 565 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 LRRC14Q15048 493 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 PAFAH1B3Q15102 231 aaKnown RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 IRF4Q15306 451 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 ST3GAL2Q16842 350 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 GLE1Q53GS7 698 aaKnown RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 ZNF542PQ5EBM4 170 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 NCBP2-AS2Q69YL0 99 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 TIGD7Q6NT04 549 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 BRICD5Q6PL45 260 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 KANSL1Q7Z3B3 1105 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 PARGQ86W56 976 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 ZSWIM9Q86XI8 627 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 MMGT1Q8N4V1 131 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 TP53I13Q8NBR0 393 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 PDCD6IPQ8WUM4 868 aaKnown RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 CENPTQ96BT3 561 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 ECHDC3Q96DC8 303 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 NT5MQ9NPB1 228 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 GPR27Q9NS67 375 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 RAB21Q9UL25 225 aa9.13□□□□□ -0.95
NDE1-207ENST00000573203 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 MAP1BP46821 2468 aaKnown RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
NDE1-207ENST00000573203 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 A0A1W2PQ67 120 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 LRRD1A4D1F6 860 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 NEMP2A6NFY4 417 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 H3BM21 787 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 TRAFD1O14545 582 aaPredicted RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 TOR1BO14657 336 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 FFAR2O15552 330 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 SOCS5O75159 536 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 DKK1O94907 266 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 MAP3K6O95382 1288 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 CSF2P04141 144 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 PROS1P07225 676 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 ELFN1P0C7U0 828 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 ALPPL2P10696 532 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 JUNDP17535 347 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 CR2P20023 1033 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 KDELR1P24390 212 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 NFKBIAP25963 317 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 GARSP41250 739 aaKnown RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 PAFAH1B1P43034 410 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 NOP2P46087 812 aaKnown RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 NAP1L1P55209 391 aaKnown RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 MAXP61244 160 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 YPEL5P62699 121 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 ITKQ08881 620 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 GALNT2Q10471 571 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 DNAJC3Q13217 504 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 BRD3Q15059 726 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 RPS6KA1Q15418 735 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 RALGPS1Q5JS13 557 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 C11orf63Q6NUN7 778 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 WDR93Q6P2C0 686 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 DHRS13Q6UX07 377 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 KDM7AQ6ZMT4 941 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 GALNT15Q8N3T1 639 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 SLC25A45Q8N413 288 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 PGBD5Q8N414 524 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 OR4C6Q8NH72 309 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 RAPGEF5Q92565 580 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 GATA6Q92908 595 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms