RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 DNAJC3Q13217 504 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 HIST2H2ACQ16777 129 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 FSCBQ5H9T9 825 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 HIST2H2AA3Q6FI13 130 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ESRP1Q6NXG1 681 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 CRTC3Q6UUV7 619 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ANGPTL8Q6UXH0 198 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ZNF473Q8WTR7 871 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 TTLL2Q9BWV7 592 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 NMRAL1Q9HBL8 299 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 IL36AQ9UHA7 158 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 STARD13Q9Y3M8 1113 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PIAS3Q9Y6X2 628 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 QSOX1O00391 747 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PRMT5O14744 637 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 ESRRAP11474 423 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 TSHRP16473 764 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 DGKAP23743 735 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 TNFRSF8P28908 595 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 IFI35P80217 286 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 ART3Q13508 389 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 MAP7Q14244 749 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 FASTKD3Q14CZ7 662 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 GLIS1Q8NBF1 620 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PIP4K2CQ8TBX8 421 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 KLF16Q9BXK1 252 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 SLC2A11Q9BYW1 496 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 MANSC1Q9H8J5 431 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 CASS4Q9NQ75 786 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 DCLK1O15075 740 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ATG13O75143 517 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 TMEM63AO94886 807 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 SHBGP04278 402 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 MAPK9P45984 424 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ZNF33AQ06730 810 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 MRPL58Q14197 206 aaKnown RBP10.13□□□□□ -0.79
SMG6-213ENST00000573166 EOGTQ5NDL2 527 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 SNX30Q5VWJ9 437 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ANO7Q6IWH7 933 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 LDB1Q86U70 411 aaPredicted RBP10.13□□□□□ -0.79
SMG6-213ENST00000573166 SLC41A1Q8IVJ1 513 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 PTCD2Q8WV60 388 aaKnown RBP10.13□□□□□ -0.79
SMG6-213ENST00000573166 SLC22A12Q96S37 553 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 RAD51BO15315 384 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 CFLARO15519 480 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 DCTN3O75935 186 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 CCDC166P0CW27 439 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 GRIA1P42261 906 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 PLK1P53350 603 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 PHEXP78562 749 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 CRY1Q16526 586 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 LYPLAL1Q5VWZ2 237 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ZDHHC20Q5W0Z9 365 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FAM45BPQ6NSW5 357 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FAM45AQ8TCE6 357 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 MED8Q96G25 268 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FBXL12Q9NXK8 326 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 CLCA2Q9UQC9 943 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FTH1P02794 183 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 RPN2P04844 631 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ALPIP09923 528 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 NEK3P51956 506 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 DPYSQ14117 519 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 TSTD2Q5T7W7 516 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ZNF776Q68DI1 518 aaPredicted RBP10.13□□□□□ -0.79
SMG6-213ENST00000573166 BRAT1Q6PJG6 821 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ZNF783Q6ZMS7 281 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FBXO39Q8N4B4 442 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 WWP1Q9H0M0 922 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 ACTR8Q9H981 624 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 NPHS2Q9NP85 383 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 OSER1Q9NX31 292 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 NCKIPSDQ9NZQ3 722 aa10.13□□□□□ -0.79
SMG6-213ENST00000573166 FAM237BA0A1B0GVD1 139 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ARHGAP10A1A4S6 786 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 F11P03951 625 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 ABHD2P08910 425 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 GKP32189 559 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 GRIA2P42262 883 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SLC7A9P82251 487 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 EIF4HQ15056 248 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 DEFB123Q8N688 67 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TCP10LQ8TDR4 215 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 SPACA7Q96KW9 195 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 RMDN2Q96LZ7 410 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TSGA13Q96PP4 275 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 EIF2B3Q9NR50 452 aaKnown RBP10.12□□□□□ -0.79
SMG6-213ENST00000573166 ARL15Q9NXU5 204 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
SMG6-213ENST00000573166 TPP1O14773 563 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms