RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 DACH1Q9UI36 760 aa19.06■□□□□ 0.64
SCARF1-204ENST00000570902 UNC13CQ8NB66 2214 aa19.06■□□□□ 0.64
SCARF1-204ENST00000570902 ANKRD62A6NC57 917 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 RHPN2P1A8MT19 583 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 PRAMEF11O60813 436 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 PRKCGP05129 697 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 CALB1P05937 261 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 UNGP13051 313 aaPredicted RBP19.05■□□□□ 0.64
SCARF1-204ENST00000570902 CHRNB2P17787 502 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 HTR7P34969 479 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 NDST2P52849 883 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 POLR2LP62875 67 aaKnown RBP19.05■□□□□ 0.64
SCARF1-204ENST00000570902 RALGDSQ12967 914 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 PTP4A2Q12974 167 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 LIPIQ6XZB0 460 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 SRLQ86TD4 932 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 ZSWIM9Q86XI8 627 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 SFTPA2Q8IWL1 248 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 PAF1Q8N7H5 531 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 NUP62CLQ9H1M0 184 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 LRRC19Q9H756 370 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 RDH14Q9HBH5 336 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 LMBRD1Q9NUN5 540 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 MOSPD1Q9UJG1 213 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 FZD10Q9ULW2 581 aa19.05■□□□□ 0.64
SCARF1-204ENST00000570902 TLN1Q9Y490 2541 aaKnown RBP19.05■□□□□ 0.64
SCARF1-204ENST00000570902 ANKRD36A6QL64 1941 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 PRSS38A1L453 326 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 SIGLEC16A6NMB1 481 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 J3KR12 359 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 DESP17661 470 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 EEF1GP26641 437 aaKnown RBP19.04■□□□□ 0.64
SCARF1-204ENST00000570902 SOX5P35711 763 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 ZNF143P52747 638 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-204ENST00000570902 TLE1Q04724 770 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 CLCA4Q14CN2 919 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 AMZ1Q400G9 498 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 AFMIDQ63HM1 303 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 BORAQ6PGQ7 559 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 ZNF438Q7Z4V0 828 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 PHF13Q86YI8 300 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-204ENST00000570902 CCDC112Q8NEF3 446 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 CCL4L1Q8NHW4 92 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 GPBAR1Q8TDU6 330 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 ECHDC3Q96DC8 303 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 GBP4Q96PP9 640 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 TAAR9Q96RI9 348 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 GSDMCQ9BYG8 508 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 GANQ9H2C0 597 aa19.04■□□□□ 0.64
SCARF1-204ENST00000570902 ARHGAP42A6NI28 874 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 CCP110O43303 1012 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 B4GAT1O43505 415 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 PALMO75781 387 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 CCL4P13236 92 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 CCNB1P14635 433 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 ALDH4A1P30038 563 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 OR1D5P58170 312 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 TPI1P60174 286 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 BCL2L1Q07817 233 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 ILF3Q12906 894 aaKnown RBP eCLIP19.03■□□□□ 0.64
SCARF1-204ENST00000570902 BIRC2Q13490 618 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 PEX6Q13608 980 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 NR1D2Q14995 579 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 TCP11X2Q5H9J9 407 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 PNCKQ6P2M8 343 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 DPPA4Q7L190 304 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 C17orf82Q86X59 251 aaPredicted RBP19.03■□□□□ 0.64
SCARF1-204ENST00000570902 ZDHHC1Q8WTX9 485 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 LGR4Q9BXB1 951 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 SLC12A9Q9BXP2 914 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 CARS2Q9HA77 564 aaKnown RBP19.03■□□□□ 0.64
SCARF1-204ENST00000570902 PCDHGA3Q9Y5H0 932 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 PTPN13Q12923 2485 aa19.03■□□□□ 0.64
SCARF1-204ENST00000570902 TEX33O43247 280 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 MYCLP1P12525 358 aaPredicted RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 GPR3P46089 330 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 MAZP56270 477 aaKnown RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 JAM2P57087 298 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 NSUN2Q08J23 767 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 TRA2AQ13595 282 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 ACOX1Q15067 660 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 CLEC16AQ2KHT3 1053 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 DPCR1Q3MIW9 517 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 DNAJC24Q6P3W2 148 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 IL22RA1Q8N6P7 574 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 TSEN2Q8NCE0 465 aaKnown RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 ZNF564Q8TBZ8 553 aaPredicted RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 JPH3Q8WXH2 748 aaPredicted RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 NKD1Q969G9 470 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 PCDHB18PQ96TA0 734 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 NUDT22Q9BRQ3 303 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 CINPQ9BW66 212 aaPredicted RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 CDH19Q9H159 772 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 PHPT1Q9NRX4 125 aaPredicted RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 SPATS2LQ9NUQ6 558 aaKnown RBP19.02■□□□□ 0.64
SCARF1-204ENST00000570902 KCTD5Q9NXV2 234 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 TUBD1Q9UJT1 453 aa19.02■□□□□ 0.64
SCARF1-204ENST00000570902 IGHV5-10-1A0A0J9YXX1 117 aa19.01■□□□□ 0.63
SCARF1-204ENST00000570902 FGF1P05230 155 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms