RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TAGLN2P37802 199 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 ETV5P41161 510 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CBX5P45973 191 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PCP4P48539 62 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KCNC1P48547 511 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GATMP50440 423 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ZNF157P51786 506 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 POLGP54098 1239 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 MFAP3P55082 362 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PRAMEP78395 509 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GTF2BQ00403 316 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP1Q07960 439 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PPP3CAQ08209 521 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GALNT2Q10471 571 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TRA2AQ13595 282 aaKnown RBP eCLIP3.59□□□□□ -1.83
SMG6-208ENST00000570874 KCNA10Q16322 511 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 BCL2A1Q16548 175 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HIF1AQ16665 826 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 DGKDQ16760 1214 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CCDC142Q17RM4 750 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 RGS21Q2M5E4 152 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CBWD6Q4V339 395 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SGO2Q562F6 1265 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 NHSL2Q5HYW2 709 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CBWD3Q5JTY5 395 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 C9orf152Q5JTZ5 239 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CBWD5Q5RIA9 395 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 EXOSC6Q5RKV6 272 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SFRP5Q5T4F7 317 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TCERG1LQ5VWI1 586 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP17Q68EM7 881 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 OVOS1Q6IE37 1185 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ABHD17CQ6PCB6 329 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FBXO38Q6PIJ6 1188 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FOXR2Q6PJQ5 311 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FAM111BQ6SJ93 734 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KLHL17Q6TDP4 642 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 METTL7BQ6UX53 244 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KDM7AQ6ZMT4 941 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MSANTD1Q6ZTZ1 278 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 RRAGAQ7L523 313 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 BTLAQ7Z6A9 289 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FRMD5Q7Z6J6 570 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CDR2LQ86X02 465 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 CBWD2Q8IUF1 395 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CNGA4Q8IV77 575 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGEF19Q8IW93 802 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CNTN4Q8IWV2 1026 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PYROXD2Q8N2H3 581 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SLC35F6Q8N357 371 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MPP5Q8N3R9 675 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CEP112Q8N8E3 955 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 C1orf127Q8N9H9 656 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TMEM145Q8NBT3 493 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 BBS1Q8NFJ9 593 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 RDM1Q8NG50 284 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 OR9A1PQ8NGU1 263 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GPR150Q8NGU9 434 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 OR8K5Q8NH50 307 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 OLIG1Q8TAK6 271 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 STYXQ8WUJ0 223 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KCNE4Q8WWG9 221 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SEPT8Q92599 483 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SEMA4DQ92854 862 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KAT5Q92993 513 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 EXT2Q93063 718 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SLC35C1Q96A29 364 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 EID2BQ96D98 161 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HDAC11Q96DB2 347 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PHF21BQ96EK2 531 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CCDC51Q96ER9 411 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 NEIL1Q96FI4 390 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 TSPAN17Q96FV3 270 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 VCPIP1Q96JH7 1222 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FER1L6-AS2Q96M78 137 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SPATA33Q96N06 139 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ACCSQ96QU6 501 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 UHRF1Q96T88 793 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 POP1Q99575 1024 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 CCT7Q99832 543 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SELENOSQ9BQE4 189 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MTG1Q9BT17 334 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 C9orf16Q9BUW7 83 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MRPL37Q9BZE1 423 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 RAD21L1Q9H4I0 556 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 DHX33Q9H6R0 707 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 MVB12BQ9H7P6 319 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MLXIPQ9HAP2 919 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 BRF2Q9HAW0 419 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGEF3Q9NR81 526 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FARSBQ9NSD9 589 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 DDX28Q9NUL7 540 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 FAM120CQ9NX05 1096 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 KCND2Q9NZV8 630 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GMIPQ9P107 970 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGAP20Q9P2F6 1191 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 KLHL14Q9P2G3 628 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 STX18Q9P2W9 335 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 HMGXB4Q9UGU5 601 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms