RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 INPP4BO15327 924 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 PSMD3O43242 534 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 GJB1P08034 283 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 PABPC1P11940 636 aaKnown RBP15.46■□□□□ 0.07
SMG6-207ENST00000570756 NFKB1P19838 968 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 GPX3P22352 226 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 YWHAQP27348 245 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 POLR2IP36954 125 aaKnown RBP15.46■□□□□ 0.07
SMG6-207ENST00000570756 OPRL1P41146 370 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 FOXM1Q08050 763 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 CD300CQ08708 224 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 UNC93AQ86WB7 457 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 SLC22A9Q8IVM8 553 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 DEFB106AQ8N104 65 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 S100ZQ8WXG8 99 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 FAM149B1Q96BN6 582 aa15.46■□□□□ 0.07
SMG6-207ENST00000570756 C16orf96A6NNT2 1141 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 A8MT66 165 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 FZD9O00144 591 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 KCNH1O95259 989 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 CD68P34810 354 aaPredicted RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 IDUAP35475 653 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 RPL34P49207 117 aaKnown RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 POU4F1Q01851 419 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 POU5F1BQ06416 359 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 TECRLQ5HYJ1 363 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 AGAP9Q5VTM2 703 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 AGAP7PQ5VUJ5 663 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 LINC00299Q6ZSB3 139 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 TP53INP2Q8IXH6 220 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 C19orf60Q96EN9 201 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 LHPPQ9H008 270 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 SMARCAD1Q9H4L7 1026 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 TNFRSF12AQ9NP84 129 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 MAP10Q9P2G4 905 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 ANAPC2Q9UJX6 822 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 LCTP09848 1927 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 SYNCRIPO60506 623 aaKnown RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 IQCF3P0C7M6 154 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 GSTM2P28161 218 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 HPCAL1P37235 193 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 MLLT10P55197 1068 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 TAS2R39P59534 338 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 CTBP1Q13363 440 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 AASDHQ4L235 1098 aaPredicted RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 PCID2Q5JVF3 399 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 RBM48Q5RL73 367 aaKnown RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 GTF2IRD2BQ6EKJ0 949 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 XAF1Q6GPH4 301 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 THOC7Q6I9Y2 204 aaKnown RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 PKN3Q6P5Z2 889 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 GTF2IRD2Q86UP8 949 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 PARP8Q8N3A8 854 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 PAPD5Q8NDF8 572 aaKnown RBP15.45■□□□□ 0.06
SMG6-207ENST00000570756 OR6B3Q8NGW1 331 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 HSFY1Q96LI6 401 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 CDHR5Q9HBB8 845 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 GPRC5DQ9NZD1 345 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 ZNF639Q9UID6 485 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 TMEM98Q9Y2Y6 226 aa15.45■□□□□ 0.06
SMG6-207ENST00000570756 RLFQ13129 1914 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 ZNF638Q14966 1978 aaKnown RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 SYNJ2BP-COX16A0A087WUM0 186 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 SPTLC1O15269 473 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 RBP1P09455 135 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 ERCC2P18074 760 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 ADORA2BP29275 332 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 GMPSP49915 693 aaPredicted RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 KPNA1P52294 538 aaPredicted RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 CSHL1Q14406 222 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 CBX2Q14781 532 aaPredicted RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 FAM187BQ17R55 369 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 CADM3Q8N126 398 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 MIER2Q8N344 545 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 HPS1Q92902 700 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 LRCH3Q96II8 777 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 CHST12Q9NRB3 414 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 CMTM6Q9NX76 183 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 COX16Q9P0S2 106 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 WARS2Q9UGM6 360 aaKnown RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 STAP1Q9ULZ2 295 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 VWA7Q9Y334 891 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 DAB1O75553 588 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 TGFB3P10600 412 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 SLC6A2P23975 617 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 ELK4P28324 431 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 LEPRP48357 1165 aaKnown RBP15.44■□□□□ 0.06
SMG6-207ENST00000570756 PLA2G16P53816 162 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 TRIM32Q13049 653 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 NDUFA5Q16718 116 aa15.44■□□□□ 0.06
SMG6-207ENST00000570756 COQ5Q5HYK3 327 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms