RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ARL4CP56559 192 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 MSLNQ13421 630 aaPredicted RBP23.51■■□□□ 1.35
RAB40C-212ENST00000569575 ANGPT1Q15389 498 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 FAM182AQ5T1J6 154 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 NLRP8Q86W28 1048 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 CACUL1Q86Y37 369 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 CBARPQ8N350 705 aaPredicted RBP23.51■■□□□ 1.35
RAB40C-212ENST00000569575 DTX3LQ8TDB6 740 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 CXorf40AQ8TE69 158 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 FOXJ1Q92949 421 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 ERLEC1Q96DZ1 483 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 TOE1Q96GM8 510 aaKnown RBP23.51■■□□□ 1.35
RAB40C-212ENST00000569575 SERPINB12Q96P63 405 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 C1QTNF7Q9BXJ2 289 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 KCNH6Q9H252 994 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 DPH5Q9H2P9 285 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 MRM3Q9HC36 420 aaKnown RBP23.51■■□□□ 1.35
RAB40C-212ENST00000569575 MTRF1LQ9UGC7 380 aaKnown RBP23.51■■□□□ 1.35
RAB40C-212ENST00000569575 CYP8B1Q9UNU6 501 aa23.51■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3DA0A087WVF3 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3IA0A087WXS9 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3EA0A087X179 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3KA0A087X1G2 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 FAM86C2PA6NEL3 165 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3FA6NER0 549 aaPredicted RBP23.5■■□□□ 1.35
RAB40C-212ENST00000569575 C10orf142B7Z368 130 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3LB9A6J9 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 USP12O75317 370 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TMEM63AO94886 807 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 PCDH8O95206 1070 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3HP0C7X1 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 CHRNA4P43681 627 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 CDKN3Q16667 212 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 PCID2Q5JVF3 399 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TEX35Q5T0J7 233 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 ANKRD22Q5VYY1 191 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3GQ6DHY5 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3CQ6IPX1 549 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 CRTC1Q6UUV9 634 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 CYP2U1Q7Z449 544 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TMC3Q7Z5M5 1100 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 HORMAD1Q86X24 394 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 NRSN1Q8IZ57 195 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TBC1D3Q8IZP1 549 aaPredicted RBP23.5■■□□□ 1.35
RAB40C-212ENST00000569575 ZCCHC9Q8N567 271 aaKnown RBP23.5■■□□□ 1.35
RAB40C-212ENST00000569575 ZBTB44Q8NCP5 570 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 APOL2Q9BQE5 337 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 TPSD1Q9BZJ3 242 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 GPR63Q9BZJ6 419 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 ZNF711Q9Y462 761 aa23.5■■□□□ 1.35
RAB40C-212ENST00000569575 C1orf232A0A0U1RR37 186 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 TCRBV7S3A2A0A539 114 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 NPIPB15A6NHN6 443 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-212ENST00000569575 TP73O15350 636 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 ELFN1P0C7U0 828 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 CTPS1P17812 591 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 LPOP22079 712 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-212ENST00000569575 ACSL1P33121 698 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 RALGDSQ12967 914 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 HIF1AQ16665 826 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 LIPIQ6XZB0 460 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 ZNF534Q76KX8 674 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 GLT6D1Q7Z4J2 308 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 CAND1Q86VP6 1230 aaKnown RBP23.49■■□□□ 1.35
RAB40C-212ENST00000569575 GAB3Q8WWW8 586 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 RRAGDQ9NQL2 400 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-212ENST00000569575 PKD2L2Q9NZM6 624 aa23.49■■□□□ 1.35
RAB40C-212ENST00000569575 NFKBIL1Q9UBC1 381 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-212ENST00000569575 SPINT1O43278 529 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 LATO43561 262 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 RNGTTO60942 597 aaKnown RBP23.48■■□□□ 1.35
RAB40C-212ENST00000569575 TM7SF2O76062 418 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 PYGLP06737 847 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 ALPIP09923 528 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 RHOXF2BP0C7M4 288 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 SP9P0CG40 484 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 PSMA3P25788 255 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 TNFRSF8P28908 595 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 HADHAP40939 763 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 FNTBP49356 437 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 PLTPP55058 493 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 MRPS25P82663 173 aaKnown RBP23.48■■□□□ 1.35
RAB40C-212ENST00000569575 SKIDA1Q1XH10 827 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 LRRC66Q68CR7 880 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 CENPUQ71F23 418 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 ZNF765Q7L2R6 523 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 PPHLN1Q8NEY8 458 aaKnown RBP23.48■■□□□ 1.35
RAB40C-212ENST00000569575 FAM174AQ8TBP5 190 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 BLOC1S5Q8TDH9 187 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 STYXQ8WUJ0 223 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 RHOXF2Q9BQY4 288 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 LRFN3Q9BTN0 628 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 C1QTNF2Q9BXJ5 285 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 DUSP15Q9H1R2 295 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-212ENST00000569575 DMTF1Q9Y222 760 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 PKP3Q9Y446 797 aa23.48■■□□□ 1.35
RAB40C-212ENST00000569575 E7ESA3 106 aa23.47■■□□□ 1.35
RAB40C-212ENST00000569575 PLK4O00444 970 aa23.47■■□□□ 1.35
RAB40C-212ENST00000569575 MAP3K13O43283 966 aa23.47■■□□□ 1.35
RAB40C-212ENST00000569575 RPP40O75818 363 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms