RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PCNX2A6NKB5 2137 aa14.56□□□□□ -0.08
COMMD4-225ENST00000569245 GOLGA6L10A0A0M3HER8 536 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 MAP3K6O95382 1288 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 PEX11BO96011 259 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 TGM2P21980 687 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 GARSP41250 739 aaKnown RBP14.55□□□□□ -0.08
COMMD4-225ENST00000569245 THOP1P52888 689 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 MAXP61244 160 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 GALNT2Q10471 571 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 PAFAH1B3Q15102 231 aaKnown RBP14.55□□□□□ -0.08
COMMD4-225ENST00000569245 CYP1B1Q16678 543 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 RAB44Q7Z6P3 723 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-225ENST00000569245 ZSWIM9Q86XI8 627 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 PGBD5Q8N414 524 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 TTC13Q8NBP0 860 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-225ENST00000569245 ADAMTS14Q8WXS8 1223 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 CENPTQ96BT3 561 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 NUDCD1Q96RS6 583 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 FRMD8P1Q9BZ68 369 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-225ENST00000569245 NOD2Q9HC29 1040 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 NT5MQ9NPB1 228 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 HOMER3Q9NSC5 361 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 KLK13Q9UKR3 277 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 TTLL3Q9Y4R7 772 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 NEUROG3Q9Y4Z2 214 aa14.55□□□□□ -0.08
COMMD4-225ENST00000569245 CABIN1Q9Y6J0 2220 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 ACACBO00763 2458 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 SPTY2D1-AS1A0A0U1RR47 76 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 A8MX80 341 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 APOC4-APOC2K7ER74 178 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 APOL1O14791 398 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 FFAR2O15552 330 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 APOC2P02655 101 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 C6P13671 934 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 MX2P20592 715 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 DGKAP23743 735 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 MMP12P39900 470 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 GBE1Q04446 702 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 DNAJC3Q13217 504 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 PTK2BQ14289 1009 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 FZD2Q14332 565 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 LRRC14Q15048 493 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 CCNG2Q16589 344 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 TIGD7Q6NT04 549 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-225ENST00000569245 DRICH1Q6PGQ1 229 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-225ENST00000569245 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 PARGQ86W56 976 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.54□□□□□ -0.08
COMMD4-225ENST00000569245 PLD5Q8N7P1 536 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 PRELID2Q8N945 189 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 CCNYQ8ND76 341 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 ECHDC3Q96DC8 303 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 IFT43Q96FT9 208 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 MGME1Q9BQP7 344 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 AP1M1Q9BXS5 423 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 MBNL1Q9NR56 388 aaKnown RBP14.54□□□□□ -0.08
COMMD4-225ENST00000569245 HAUS2Q9NVX0 235 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 UCKL1Q9NWZ5 548 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 TOR4AQ9NXH8 423 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 TPRP12270 2363 aaKnown RBP14.54□□□□□ -0.08
COMMD4-225ENST00000569245 SPEGQ15772 3267 aa14.54□□□□□ -0.08
COMMD4-225ENST00000569245 A0A1W2PQ67 120 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 NEMP2A6NFY4 417 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 H3BM21 787 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 TRAFD1O14545 582 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-225ENST00000569245 PHF2O75151 1096 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 ELFN1P0C7U0 828 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 ALPPL2P10696 532 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 JUNDP17535 347 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 CCNCP24863 283 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 NFKBIAP25963 317 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 IGFALSP35858 605 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 PFN3P60673 137 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 HNRNPKP61978 463 aaKnown RBP eCLIP14.53□□□□□ -0.08
COMMD4-225ENST00000569245 TUBB4BP68371 445 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 IRF4Q15306 451 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 KANSL1Q7Z3B3 1105 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 SLC25A45Q8N413 288 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 MMGT1Q8N4V1 131 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 TP53I13Q8NBR0 393 aaPredicted RBP14.53□□□□□ -0.08
COMMD4-225ENST00000569245 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 NSMCE3Q96MG7 304 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 SEMA3CQ99985 751 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 RBM22Q9NW64 420 aaKnown RBP eCLIP14.53□□□□□ -0.08
COMMD4-225ENST00000569245 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
COMMD4-225ENST00000569245 MSRB2Q9Y3D2 182 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 HEY1Q9Y5J3 304 aa14.53□□□□□ -0.08
COMMD4-225ENST00000569245 FRYQ5TBA9 3013 aa14.52□□□□□ -0.08
COMMD4-225ENST00000569245 C1QTNF9BB2RNN3 333 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 MATN3O15232 486 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 SIGLEC6O43699 453 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 SOCS5O75159 536 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 PIAS2O75928 621 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 CPP00450 1065 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 CSF2P04141 144 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 PCCBP05166 539 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 C1QTNF9P0C862 333 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 CCNB1P14635 433 aa14.52□□□□□ -0.09
COMMD4-225ENST00000569245 CR2P20023 1033 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms