RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KIF17Q9P2E2 1029 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 TNFSF13BQ9Y275 285 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARAP2Q8WZ64 1704 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 HTTP42858 3142 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 BRCA2P51587 3418 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCL15-CCL14A0A0B4J2E2 113 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 FAM90A10PA6NDY2 464 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 HMX3A6NHT5 357 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 MSI1O43347 362 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 FAM155BO75949 473 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 XBP1P17861 261 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 AVPR2P30518 371 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 ADD2P35612 726 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 PCP4P48539 62 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 RIPK4P57078 832 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 PMPCAQ10713 525 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 PTGR1Q14914 329 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCL15Q16663 113 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 HSP90AB3PQ58FF7 597 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 FAM133BQ5BKY9 247 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 ENTPD8Q5MY95 495 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 TTC39AQ5SRH9 613 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 FAM205BPQ63HN1 556 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 SYNE3Q6ZMZ3 975 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 KLBQ86Z14 1044 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 CREBRFQ8IUR6 639 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 VPS52Q8N1B4 723 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 CERS5Q8N5B7 392 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 DEFB123Q8N688 67 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 LSMEM1Q8N8F7 131 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 ENDOVQ8N8Q3 282 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 C2CD4CQ8TF44 421 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 NSMCE1Q8WV22 266 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 UCMAQ8WVF2 138 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 ASB5Q8WWX0 329 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 INPP5DQ92835 1189 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 NAF1Q96HR8 494 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 AGXT2Q9BYV1 514 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 EBF3Q9H4W6 596 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 Q9N2J8 555 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 OLA1Q9NTK5 396 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMEM248Q9NWD8 314 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 NDUFAF4Q9P032 175 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 AASSQ9UDR5 926 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 DDX60LQ5H9U9 1706 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 MYH13Q9UKX3 1938 aa3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 KIAA0100Q14667 2235 aaKnown RBP3.58□□□□□ -1.84
HMGB1P6-201ENST00000569046 COL6A3P12111 3177 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 A0A1W2PPH5 198 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 FSD2A1L4K1 749 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TCP10L2B9ZVM9 353 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 E7EVH7 732 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 AHCYL1O43865 530 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 USO1O60763 962 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZC3H11AO75152 810 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TIPRLO75663 272 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 KRT38O76015 456 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 SYF2O95926 243 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 IFNA2P01563 188 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ALPLP05186 524 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCL5P13501 91 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ACP5P13686 325 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PKMP14618 531 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CHN1P15882 459 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 HOXB9P17482 250 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 SCP2P22307 547 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CST5P28325 142 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TYK2P29597 1187 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 KRT20P35900 424 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 POLD2P49005 469 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCR5P51681 352 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZBED6P86452 979 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TLE2Q04725 743 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PPATQ06203 517 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRPC3Q13507 836 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CUL4BQ13620 913 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 EFR3AQ14156 821 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 SMAD1Q15797 465 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 MEA1Q16626 185 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ANKRD45Q5TZF3 282 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZNF549Q6P9A3 640 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 C9orf47Q6ZRZ4 202 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 KDELC2Q7Z4H8 507 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ANKS1BQ7Z6G8 1248 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ANKRD23Q86SG2 305 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCDC25Q86WR0 208 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 APOBEC3FQ8IUX4 373 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 SAMD14Q8IZD0 417 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 DOCK3Q8IZD9 2030 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PTGR2Q8N8N7 351 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 RUBCNQ92622 972 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 KCNJ9Q92806 393 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 EVPLQ92817 2033 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZKSCAN4Q969J2 545 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 NAP1L5Q96NT1 182 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PIGSQ96S52 555 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 NUDT16L1Q9BRJ7 211 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms