RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 PHTF1Q9UMS5 762 aa16.68■□□□□ 0.26
CDR2-207ENST00000569045 PCDHGC4Q9Y5F7 938 aa16.68■□□□□ 0.26
CDR2-207ENST00000569045 DGKBQ9Y6T7 804 aa16.68■□□□□ 0.26
CDR2-207ENST00000569045 LRRK1Q38SD2 2015 aa16.68■□□□□ 0.26
CDR2-207ENST00000569045 A0A087X0T9 212 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 A8MX80 341 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TMX2-CTNND1H3BSU7 103 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TNFRSF10CO14798 259 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 MAFKO60675 156 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 DXOO77932 396 aaKnown RBP16.67■□□□□ 0.26
CDR2-207ENST00000569045 FAM228BP0C875 321 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TCF4P15884 667 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 VIPR1P32241 457 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 ARHGEF7Q14155 803 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TCEA2Q15560 299 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 C3orf38Q5JPI3 329 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 PERM1Q5SV97 790 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TAF8Q7Z7C8 310 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 MAP7D3Q8IWC1 876 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 TP53INP2Q8IXH6 220 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 PLA2G15Q8NCC3 412 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 SPOCK2Q92563 424 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 NUS1Q96E22 293 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 BTBD6Q96KE9 485 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 RBM15Q96T37 977 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDR2-207ENST00000569045 MGME1Q9BQP7 344 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 ETNK2Q9NVF9 386 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 B4GALT6Q9UBX8 382 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 MOSPD1Q9UJG1 213 aa16.67■□□□□ 0.26
CDR2-207ENST00000569045 ASXL3Q9C0F0 2248 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 HTRA2O43464 458 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 CELA2BP08218 269 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 SLC25A11Q02978 314 aaKnown RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 ITKQ08881 620 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 ARMC12Q5T9G4 340 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 PNCKQ6P2M8 343 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 USP45Q70EL2 814 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 ARL14Q8N4G2 192 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 KYQ8NBH2 561 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 KCTD6Q8NC69 237 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 FUBP1Q96AE4 644 aaKnown RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 ATXN7L3BQ96GX2 97 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 UBL7Q96S82 380 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 ZNHIT6Q9NWK9 470 aaKnown RBP16.66■□□□□ 0.26
CDR2-207ENST00000569045 CTTNBP2NLQ9P2B4 639 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 SATB2Q9UPW6 733 aa16.66■□□□□ 0.26
CDR2-207ENST00000569045 TTC24A2A3L6 582 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 GYPCP04921 128 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 TPM1P09493 284 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 HOXB3P14651 431 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 CR2P20023 1033 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 CES1P23141 567 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 GJC1P36383 396 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 TRIM23P36406 574 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 UCNP55089 124 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 PDK2Q15119 407 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 SOWAHCQ53LP3 525 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 ZFYVE27Q5T4F4 411 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 DENND2CQ68D51 928 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 TXNRD3NBQ6F5E7 133 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 TIGD7Q6NT04 549 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 IGF2-ASQ6U949 168 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 FAM46DQ8NEK8 389 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 WDR36Q8NI36 951 aaKnown RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 OR1E3Q8WZA6 343 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 CCDC74AQ96AQ1 378 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 CCDC97Q96F63 343 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 PDXPQ96GD0 296 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 FCRL3Q96P31 734 aaPredicted RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 GFM1Q96RP9 751 aaKnown RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 ANP32EQ9BTT0 268 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 STRADBQ9C0K7 418 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 POLR1EQ9GZS1 481 aaKnown RBP16.65■□□□□ 0.26
CDR2-207ENST00000569045 CYP4F12Q9HCS2 524 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 NT5MQ9NPB1 228 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 UVRAGQ9P2Y5 699 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 PCDHGA8Q9Y5G5 932 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 ENTPD2Q9Y5L3 495 aa16.65■□□□□ 0.26
CDR2-207ENST00000569045 CCDC187A0A096LP49 1063 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 GOLGA6CA6NDK9 693 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 GOLGA6BA6NDN3 693 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 PSMD11O00231 422 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 HEXIM1O94992 359 aaKnown RBP16.64■□□□□ 0.25
CDR2-207ENST00000569045 PEX11BO96011 259 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 KRT7P08729 469 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 H2AFZP0C0S5 128 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 GOLGA6DP0CG33 693 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 MYCLP1P12525 358 aaPredicted RBP16.64■□□□□ 0.25
CDR2-207ENST00000569045 CA4P22748 312 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 CASP14P31944 242 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 MLLT3P42568 568 aaPredicted RBP16.64■□□□□ 0.25
CDR2-207ENST00000569045 MAXP61244 160 aa16.64■□□□□ 0.25
CDR2-207ENST00000569045 PEX6Q13608 980 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms