RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PSMA2P25787 234 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 NDST2P52849 883 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 MAPK10P53779 464 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 UBXN1Q04323 297 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 NFATC3Q12968 1075 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 LINC00303Q3SY05 128 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 C14orf28Q4W4Y0 310 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 PHF19Q5T6S3 580 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 SPECC1LQ69YQ0 1117 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 USP53Q70EK8 1073 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 MCOLN2Q8IZK6 566 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 EXTL1Q92935 676 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 SNRNP25Q9BV90 132 aaKnown RBP15.58■□□□□ 0.08
NME3-211ENST00000568561 TRIM4Q9C037 500 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 DPEP2Q9H4A9 486 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 SP110Q9HB58 689 aa15.58■□□□□ 0.08
NME3-211ENST00000568561 TMX2-CTNND1H3BSU7 103 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 TEX33O43247 280 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 LIPCP11150 499 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 GLB1P16278 677 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 SCNN1BP51168 640 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 MAZP56270 477 aaKnown RBP15.57■□□□□ 0.08
NME3-211ENST00000568561 NFKB2Q00653 900 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 BCL2L1Q07817 233 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
NME3-211ENST00000568561 ACOX1Q15067 660 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 PPP6R3Q5H9R7 873 aaPredicted RBP15.57■□□□□ 0.08
NME3-211ENST00000568561 ACAD10Q6JQN1 1059 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 RFX8Q6ZV50 586 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 DPPA4Q7L190 304 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 ARFGAP1Q8N6T3 406 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 OR6C4Q8NGE1 309 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 COL26A1Q96A83 441 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 ECHDC3Q96DC8 303 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 TRIM7Q9C029 511 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 SEMA6CQ9H3T2 930 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 WDR26Q9H7D7 661 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 RDH14Q9HBH5 336 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 LRIT1Q9P2V4 623 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 B4GALT6Q9UBX8 382 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 LIMA1Q9UHB6 759 aaKnown RBP15.57■□□□□ 0.08
NME3-211ENST00000568561 APPL1Q9UKG1 709 aa15.57■□□□□ 0.08
NME3-211ENST00000568561 DAPK3O43293 454 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 ERCC2P18074 760 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 WT1P19544 449 aaPredicted RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 CSNK1DP48730 415 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 ZFP36L1Q07352 338 aaKnown RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 MAMLD1Q13495 774 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 ARHGEF7Q14155 803 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 C16orf72Q14CZ0 275 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 AMZ1Q400G9 498 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 MAP9Q49MG5 647 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 AFMIDQ63HM1 303 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 DENND2CQ68D51 928 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 OGFOD3Q6PK18 319 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 SLITRK4Q8IW52 837 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 PTCD2Q8WV60 388 aaKnown RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 USP7Q93009 1102 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 SGF29Q96ES7 293 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 CARS2Q9HA77 564 aaKnown RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 SPATS2LQ9NUQ6 558 aaKnown RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 ACSL6Q9UKU0 697 aa15.56■□□□□ 0.08
NME3-211ENST00000568561 ZFC3H1O60293 1989 aaKnown RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 UBR5O95071 2799 aaPredicted RBP15.56■□□□□ 0.08
NME3-211ENST00000568561 BSNQ9UPA5 3926 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 PRSS38A1L453 326 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 C9orf172C9J069 976 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 TRAFD1O14545 582 aaPredicted RBP15.55■□□□□ 0.08
NME3-211ENST00000568561 NVLO15381 856 aaKnown RBP15.55■□□□□ 0.08
NME3-211ENST00000568561 FAM87AP0C7U9 286 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 DESP17661 470 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 KELP23276 732 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 HTR7P34969 479 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 OR1D5P58170 312 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 CYP4F2P78329 520 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 SLC10A7Q0GE19 358 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 PTPRRQ15256 657 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 MANEAQ5SRI9 462 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 ERMARDQ5T6L9 678 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 PNCKQ6P2M8 343 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 CYP4V2Q6ZWL3 525 aaPredicted RBP15.55■□□□□ 0.08
NME3-211ENST00000568561 PDCD6IPQ8WUM4 868 aaKnown RBP15.55■□□□□ 0.08
NME3-211ENST00000568561 PATE1Q8WXA2 126 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 JPH3Q8WXH2 748 aaPredicted RBP15.55■□□□□ 0.08
NME3-211ENST00000568561 NUS1Q96E22 293 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 ARHGAP9Q9BRR9 750 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 CLMPQ9H6B4 373 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 LMBRD1Q9NUN5 540 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 PCDHGA4Q9Y5G9 962 aa15.55■□□□□ 0.08
NME3-211ENST00000568561 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 TNFRSF10CO14798 259 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 B4GAT1O43505 415 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 FUCA1P04066 466 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 FERP16591 822 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 AK4P27144 223 aaPredicted RBP15.54■□□□□ 0.08
NME3-211ENST00000568561 TRIM23P36406 574 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 B4GALNT1Q00973 533 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 MYL5Q02045 173 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 IL10RBQ08334 325 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms