RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 NXNL1Q96CM4 212 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 IMP4Q96G21 291 aaKnown RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 POM121Q96HA1 1249 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 FEM1CQ96JP0 617 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 BTN2A3PQ96KV6 586 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 SUSD3Q96L08 255 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 FCRL2Q96LA5 508 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 C8orf48Q96LL4 319 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 ZNF597Q96LX8 424 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 PRICKLE1Q96MT3 831 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 BIRC8Q96P09 236 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 GCNAQ96QF7 691 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 UHRF1Q96T88 793 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 NDNQ99608 321 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 SH3GL1Q99961 368 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 DDX50Q9BQ39 737 aaKnown RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 ERVK-6Q9BXR3 956 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 CEP41Q9BYV8 373 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 SIK2Q9H0K1 926 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 COPS7BQ9H9Q2 264 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 CAB39LQ9H9S4 337 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 CLK4Q9HAZ1 481 aaKnown RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 MAGEE1Q9HCI5 957 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 MAN1C1Q9NR34 630 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 TMEM248Q9NWD8 314 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 TAS2R13Q9NYV9 303 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 PKD2L2Q9NZM6 624 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 RIMS3Q9UJD0 308 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 TNPO3Q9Y5L0 923 aaKnown RBP7.66□□□□□ -1.18
ATXN3-250ENST00000568290 ZNF236Q9UL36 1845 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 EVPLQ92817 2033 aa7.66□□□□□ -1.18
ATXN3-250ENST00000568290 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TCRBV3S1A0A5B6 114 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ARL5CA6NH57 179 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CAPN8A6NHC0 703 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 C2orf81A6NN90 581 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 C16orf96A6NNT2 1141 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 KCNU1A8MYU2 1149 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 FAM155AB1AL88 458 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 E9PAM4 449 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 F5H423 210 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 STX16-NPEPL1H3BU86 382 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CLDN5O00501 218 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 STX16O14662 325 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 PTGESO14684 152 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ACOT8O14734 319 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 NRP1O14786 923 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 AZIN1O14977 448 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TREHO43280 583 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 GDF9O60383 454 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 RAMP2O60895 175 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 PMPCBO75439 489 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 PAGE1O75459 146 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 DNAJB5O75953 348 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 B3GAT3O94766 335 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 SUPT7LO94864 414 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 BMP10O95393 424 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 H6PDO95479 791 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 EOMESO95936 686 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 S100BP04271 92 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 FYNP06241 537 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CCDC166P0CW27 439 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 HSD17B1P14061 328 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TPH1P17752 444 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 GLRBP48167 497 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 NDUFV1P49821 464 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 RPS6KA3P51812 740 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TBX4P57082 545 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TAS2R39P59534 338 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 IRF9Q00978 393 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 YWHAHQ04917 246 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 RING1Q06587 406 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 NSUN2Q08J23 767 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ELAVL2Q12926 359 aaKnown RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 DLG1Q12959 904 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 DCTN2Q13561 401 aaKnown RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ZNF235Q14590 738 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CRY1Q16526 586 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 UPP1Q16831 310 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 SMU1Q2TAY7 513 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 GJC2Q5T442 439 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 HECTD2Q5U5R9 776 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 MANEALQ5VSG8 457 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 MFSD14CQ5VZR4 134 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CES4AQ5XG92 561 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 AFMIDQ63HM1 303 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ANKS6Q68DC2 871 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 REP15Q6BDI9 236 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 PPP4R4Q6NUP7 873 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ESRP1Q6NXG1 681 aaKnown RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 METTL2BQ6P1Q9 378 aaKnown RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TTC23LQ6PF05 361 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 AFTPHQ6ULP2 937 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 NAPRTQ6XQN6 538 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 TICAM1Q8IUC6 712 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CILP2Q8IUL8 1156 aa7.65□□□□□ -1.18
ATXN3-250ENST00000568290 ERI1Q8IV48 349 aaKnown RBP7.65□□□□□ -1.18
ATXN3-250ENST00000568290 CENPLQ8N0S6 344 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms