RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SDCCAG8Q86SQ7 713 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 C10orf107Q8IVU9 208 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 MFSD6LQ8IWD5 586 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TRIM42Q8IWZ5 723 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 KCTD4Q8WVF5 259 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SORCS1Q8WY21 1168 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 MYO19Q96H55 970 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 FAM96AQ9H5X1 160 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 NMRAL1Q9HBL8 299 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CATSPERZQ9NTU4 200 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 DUS2Q9NX74 493 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 HECAQ9UBI9 543 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 ARL2BPQ9Y2Y0 163 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 EPOPA6NHQ4 379 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SLC35E2BP0CK96 405 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SRCP12931 536 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CPA3P15088 417 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ALDH3A1P30838 453 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 AP1S1P61966 158 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CSHL1Q14406 222 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ITIH4Q14624 930 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 INSCQ1MX18 579 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ZRANB3Q5FWF4 1079 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TBC1D1Q86TI0 1168 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 CELF5Q8N6W0 485 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 OR2AP1Q8NGE2 309 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CYB5D2Q8WUJ1 264 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 OMDQ99983 421 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ZDHHC6Q9H6R6 413 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ATP13A3Q9H7F0 1226 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 POLR3BQ9NW08 1133 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 FKBPLQ9UIM3 349 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ANKRD12Q6UB98 2062 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 C1orf232A0A0U1RR37 186 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TK2O00142 265 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SLC9A3R1O14745 358 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 S1PR4O95977 384 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 PENKP01210 267 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 PROCP04070 461 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 POLR2EP19388 210 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 SERPINA4P29622 427 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 LEPRP48357 1165 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 ECT2LQ008S8 904 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SLC20A2Q08357 652 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 STX3Q13277 289 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ITGA9Q13797 1035 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SEMA3AQ14563 771 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 DUSP6Q16828 381 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CCDC153Q494R4 210 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TCEAL5Q5H9L2 206 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 Q6ZVU0 165 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 VN1R2Q8NFZ6 395 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TTC8Q8TAM2 541 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 FGF13Q92913 245 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 NXNL1Q96CM4 212 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 RMDN2Q96LZ7 410 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 MCMBPQ9BTE3 642 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 EBF3Q9H4W6 596 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SFXN1Q9H9B4 322 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 GPAMQ9HCL2 828 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ACSS2Q9NR19 701 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 ABCF3Q9NUQ8 709 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 COPG2Q9UBF2 871 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 VWA7Q9Y334 891 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 RRP15Q9Y3B9 282 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 PKP3Q9Y446 797 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 BRWD1Q9NSI6 2320 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 SIN3BO75182 1162 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 NDUFS3O75489 264 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 PGLSO95336 258 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FSHRP23945 695 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CRABP2P29373 138 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MC4RP32245 332 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 NNMTP40261 264 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MAGEA12P43365 314 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 CDKN1CP49918 316 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 ZNF140P52738 457 aaPredicted RBP7.07□□□□□ -1.28
SMG1-215ENST00000568239 POU4F1Q01851 419 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 USP4Q13107 963 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 PCLAFQ15004 111 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 DHCR24Q15392 516 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 SLC14A2Q15849 920 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 LRRC73Q5JTD7 316 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 FAM78AQ5JUQ0 283 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 HECTD2Q5U5R9 776 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 MBLAC2Q68D91 279 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 C22orf39Q6P5X5 142 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 C6orf89Q6UWU4 347 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 TAS2R42Q7RTR8 314 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
SMG1-215ENST00000568239 METTL3Q86U44 580 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms