RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MAGOHBQ96A72 148 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 OXNAD1Q96HP4 312 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 TRIB3Q96RU7 358 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 LRRC40Q9H9A6 602 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 TM9SF3Q9HD45 589 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 UBP1Q9NZI7 540 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 HACD3Q9P035 362 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 DOCK9Q9BZ29 2069 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 PCDH15Q96QU1 1955 aa12.21□□□□□ -0.46
SF3B3-208ENST00000567250 PI4KAP42356 2102 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 OTOGLQ3ZCN5 2332 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 C1orf232A0A0U1RR37 186 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 IGLON5A6NGN9 336 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 A6NNZ2 444 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 CCDC188H7C350 402 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 TOR1BO14657 336 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 FPGTO14772 594 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SLC31A1O15431 190 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 MMP20O60882 483 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 PRLP01236 227 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SYPP08247 313 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ALPIP09923 528 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ZNF806P0C7X5 589 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 CTPS1P17812 591 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 CD38P28907 300 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 HNF1BP35680 557 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 LMAN1P49257 510 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 C21orf59P57076 290 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
SF3B3-208ENST00000567250 STAT4Q14765 748 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ACOX1Q15067 660 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SLC1A5Q15758 541 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 CNGA3Q16281 694 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 QPCTQ16769 361 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 PLA2G2CQ5R387 149 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 LRRC66Q68CR7 880 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 IL27RAQ6UWB1 636 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 LIPIQ6XZB0 460 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 IQCHQ86VS3 1027 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SLC6A18Q96N87 628 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 LENG8Q96PV6 779 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ZDHHC5Q9C0B5 715 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 TRABDQ9H4I3 376 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SEMA4GQ9NTN9 838 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 TMEM74BQ9NUR3 256 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 SLC6A14Q9UN76 642 aa12.2□□□□□ -0.46
SF3B3-208ENST00000567250 ADAMTS9Q9P2N4 1935 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 CACNA1EQ15878 2313 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 LOC285095A0A1B0GVY8 99 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ECEL1O95672 775 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 AP2A1O95782 977 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ITIH2P19823 946 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 LHCGRP22888 699 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 COILP38432 576 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-208ENST00000567250 IHHQ14623 411 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 LRRC14Q15048 493 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 KYAT3Q6YP21 454 aaKnown RBP12.19□□□□□ -0.46
SF3B3-208ENST00000567250 KDELC2Q7Z4H8 507 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 CREG2Q8IUH2 290 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 KLHDC8BQ8IXV7 354 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 TMEM145Q8NBT3 493 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 C1orf216Q8TAB5 229 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 KLK6Q92876 244 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 NUS1Q96E22 293 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 TBL1YQ9BQ87 522 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ORAI3Q9BRQ5 295 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 MAGEE1Q9HCI5 957 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 RAB6BQ9NRW1 208 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 RAD18Q9NS91 495 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
SF3B3-208ENST00000567250 PKD2L2Q9NZM6 624 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ZNF711Q9Y462 761 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 ZNF292O60281 2723 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 MYLKQ15746 1914 aa12.19□□□□□ -0.46
SF3B3-208ENST00000567250 LAMA1P25391 3075 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 ZFHX2Q9C0A1 2572 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 RGSL1A5PLK6 1076 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 A8MX80 341 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 WNT9AO14904 365 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 VILLO15195 856 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 RECQL5O94762 991 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 METTL18O95568 372 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 PYGLP06737 847 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 ATXN1LP0C7T5 689 aaKnown RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 RABIFP47224 123 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 KCNJ1P48048 391 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 BASP1P80723 227 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms