RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-206ENST00000566254 TMEM176AQ96HP8 235 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 NAF1Q96HR8 494 aaKnown RBP9.03□□□□□ -0.96
CFDP1-206ENST00000566254 NUP58Q9BVL2 599 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 C6orf106Q9H6K1 298 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-206ENST00000566254 APOBEC3GQ9HC16 384 aaKnown RBP9.03□□□□□ -0.96
CFDP1-206ENST00000566254 CSNK1G1Q9HCP0 422 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 TM9SF3Q9HD45 589 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 PLK2Q9NYY3 685 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 WDR35Q9P2L0 1181 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 SCML2Q9UQR0 700 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 PCDHA5Q9Y5H7 936 aa9.03□□□□□ -0.96
CFDP1-206ENST00000566254 COL5A1P20908 1838 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-206ENST00000566254 MGAQ8IWI9 3026 aa9.02□□□□□ -0.96
CFDP1-206ENST00000566254 SLC28A2O43868 658 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 SYNCRIPO60506 623 aaKnown RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 IGLV3-19P01714 112 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 C8BP07358 591 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ENO2P09104 434 aaPredicted RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ACADMP11310 421 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 OXTRP30559 389 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 GTF2H1P32780 548 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ACSL1P33121 698 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 PRCPP42785 496 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 COPAP53621 1224 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 EFEMP1Q12805 493 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ODF1Q14990 250 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 NFIL3Q16649 462 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 EDRF1Q3B7T1 1238 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 PRAMEF14Q5SWL7 426 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ARHGAP40Q5TG30 622 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 HTR3DQ70Z44 454 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 WDR75Q8IWA0 830 aaKnown RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 TTC39CQ8N584 583 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 TMEM174Q8WUU8 243 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 JPH3Q8WXH2 748 aaPredicted RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 FAM168AQ92567 244 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 DUSP16Q9BY84 665 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 NMUR1Q9HB89 426 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 CPNE5Q9HCH3 593 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 IL37Q9NZH6 218 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 HESX1Q9UBX0 185 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.02□□□□□ -0.97
CFDP1-206ENST00000566254 PCDHGA1Q9Y5H4 931 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 MRFAP1Q9Y605 127 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 CABIN1Q9Y6J0 2220 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 ATMQ13315 3056 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 SPTA1P02549 2419 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 TMEM131Q92545 1883 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 KNL1Q8NG31 2342 aa9.02□□□□□ -0.97
CFDP1-206ENST00000566254 KNTC1P50748 2209 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 FAM237AA0A1B0GTK4 181 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 PRSS38A1L453 326 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 KLHL33A6NCF5 533 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 RFPL1O75677 317 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 LDOC1O95751 146 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ZDHHC11BP0C7U3 371 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 C6P13671 934 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ACADVLP49748 655 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 COG7P83436 770 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 FKBP3Q00688 224 aaKnown RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 RHDQ02161 417 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ROM1Q03395 351 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 GEN1Q17RS7 908 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 GOLGA7BQ2TAP0 167 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 CCDC40Q4G0X9 1142 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ZNF658Q5TYW1 1059 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 PRAMEF9Q5VWM5 478 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 VASNQ6EMK4 673 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 KANSL1Q7Z3B3 1105 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ARHGAP18Q8N392 663 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 RNF139Q8WU17 664 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 BIRC7Q96CA5 298 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 LGMNQ99538 433 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 LRRC4Q9HBW1 653 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 OSER1Q9NX31 292 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 THAP10Q9P2Z0 257 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 ARMCX3Q9UH62 379 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-206ENST00000566254 COL6A6A6NMZ7 2263 aa9.01□□□□□ -0.97
CFDP1-206ENST00000566254 A0A1B0GTQ1 180 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 FAM92AA1XBS5 289 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 HHLA1C9JL84 531 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 PSMA7O14818 248 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 PAPSS1O43252 624 aaPredicted RBP9□□□□□ -0.97
CFDP1-206ENST00000566254 FSBPO95073 299 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 PRKCHP24723 683 aa9□□□□□ -0.97
CFDP1-206ENST00000566254 CORO1AP31146 461 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms