RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PCDH18Q9HCL0 1135 aa15.23■□□□□ 0.03
CMTM3-212ENST00000566121 ASCL3Q9NQ33 180 aa15.23■□□□□ 0.03
CMTM3-212ENST00000566121 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.23■□□□□ 0.03
CMTM3-212ENST00000566121 ETNK2Q9NVF9 386 aa15.23■□□□□ 0.03
CMTM3-212ENST00000566121 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
CMTM3-212ENST00000566121 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
CMTM3-212ENST00000566121 LRRK1Q38SD2 2015 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 A0A087X0T9 212 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 CPED1A4D0V7 1026 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 ZNF487B1APH4 448 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 FAM228BP0C875 321 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 CTSEP14091 401 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 AMPD1P23109 780 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 PCBP4P57723 403 aaKnown RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 TLE3Q04726 772 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 ZNF235Q14590 738 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 CLPPQ16740 277 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 HADHQ16836 314 aaKnown RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 ENPP7Q6UWV6 458 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 C17orf82Q86X59 251 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 VSIG1Q86XK7 387 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 OR56A4Q8NGH8 313 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 MAML1Q92585 1016 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 FUBP1Q96AE4 644 aaKnown RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 CCDC97Q96F63 343 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 LIN37Q96GY3 246 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 TEX101Q9BY14 249 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 THAP2Q9H0W7 228 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 CAAP1Q9H8G2 361 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 THSD1Q9NS62 852 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 MYO1AQ9UBC5 1043 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 KLQ9UEF7 1012 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 COQ6Q9Y2Z9 468 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.22■□□□□ 0.03
CMTM3-212ENST00000566121 ENTPD2Q9Y5L3 495 aa15.22■□□□□ 0.03
CMTM3-212ENST00000566121 COL27A1Q8IZC6 1860 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 TEX51A0A1B0GUA7 166 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 CDRT15L2A8MXV6 281 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 FZD6O60353 706 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 CYP2A6P11509 494 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 KRT10P13645 584 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 GABREP78334 506 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 C1orf61Q13536 156 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 PEX6Q13608 980 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 PDK2Q15119 407 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 TDRD12Q587J7 1177 aaKnown RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 PERM1Q5SV97 790 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 CLEC14AQ86T13 490 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 HID1Q8IV36 788 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 MAP7D3Q8IWC1 876 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 TP53INP2Q8IXH6 220 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 WDR36Q8NI36 951 aaKnown RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 TSACCQ96A04 125 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 SCARF2Q96GP6 870 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 PRR11Q96HE9 360 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 CCDC3Q9BQI4 270 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 ZNF670Q9BS34 389 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 NUP85Q9BW27 656 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 B3GNT4Q9C0J1 378 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 NOD2Q9HC29 1040 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 HAUS2Q9NVX0 235 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 TRNAU1APQ9NX07 287 aaKnown RBP15.21■□□□□ 0.03
CMTM3-212ENST00000566121 B4GALT6Q9UBX8 382 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 ANAPC7Q9UJX3 599 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 ACSL6Q9UKU0 697 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.03
CMTM3-212ENST00000566121 SYCE3A1L190 88 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 TMEM202A6NGA9 273 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GOLGA6L19H0YKK7 550 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 MATN3O15232 486 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 PGLSO95336 258 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GYPCP04921 128 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 PYGLP06737 847 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 TPM3P06753 285 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 MYCLP1P12525 358 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-212ENST00000566121 MYF5P13349 255 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 TCF4P15884 667 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GLB1P16278 677 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 CCNCP24863 283 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 ITPKBP27987 946 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 CCKBRP32239 447 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 VIPR1P32241 457 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 MAN1A1P33908 653 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 MMP13P45452 471 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 RPL26P61254 145 aaKnown RBP15.2■□□□□ 0.02
CMTM3-212ENST00000566121 GALNT2Q10471 571 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 ASTE1Q2TB18 679 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-212ENST00000566121 CERCAMQ5T4B2 595 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 TXNRD3NBQ6F5E7 133 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 ZNF765Q7L2R6 523 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 LUZP1Q86V48 1076 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 SPACA3Q8IXA5 215 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 NDUFAF2Q8N183 169 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 PGBD5Q8N414 524 aa15.2■□□□□ 0.02
CMTM3-212ENST00000566121 ATPAF2Q8N5M1 289 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms