RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZNF599Q96NL3 588 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 SMIM14Q96QK8 99 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 RBM15Q96T37 977 aaKnown RBP eCLIP23.82■■□□□ 1.41e-6■■■■■ 29.9
RAB40C-209ENST00000565511 DOLKQ9UPQ8 538 aa23.82■■□□□ 1.4
RAB40C-209ENST00000565511 GCN1Q92616 2671 aaKnown RBP23.82■■□□□ 1.4
RAB40C-209ENST00000565511 A0A1W2PQJ5 194 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 LHCGRP22888 699 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 IL4RP24394 825 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 ARL4AP40617 200 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 ZNF235Q14590 738 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 ESRP1Q6NXG1 681 aaKnown RBP23.81■■□□□ 1.4
RAB40C-209ENST00000565511 PCSK4Q6UW60 755 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 NIPA2Q8N8Q9 360 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 ZNF248Q8NDW4 579 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 PTCD2Q8WV60 388 aaKnown RBP23.81■■□□□ 1.4
RAB40C-209ENST00000565511 CPLX3Q8WVH0 158 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 NUDCD1Q96RS6 583 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 UBL7Q96S82 380 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-209ENST00000565511 MGME1Q9BQP7 344 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 NUP85Q9BW27 656 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 ANAPC7Q9UJX3 599 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 NENFQ9UMX5 172 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 DGKBQ9Y6T7 804 aa23.81■■□□□ 1.4
RAB40C-209ENST00000565511 KALRNO60229 2985 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 A0A1W2PQM1 296 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 TCEA3O75764 348 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 C1QL1O75973 258 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 CYP1A2P05177 515 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 ALPIP09923 528 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 TRIM23P36406 574 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 RENBPP51606 427 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 CCL7P80098 99 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 IHHQ14623 411 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 ACOX1Q15067 660 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 BOLA3Q53S33 107 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 LVRNQ6Q4G3 990 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 SDR16C5Q8N3Y7 309 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 PAF1Q8N7H5 531 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 GPR156Q8NFN8 814 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 OR56A4Q8NGH8 313 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 TPCN2Q8NHX9 752 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 PDCD6IPQ8WUM4 868 aaKnown RBP23.8■■□□□ 1.4
RAB40C-209ENST00000565511 TEKT4Q8WW24 435 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 SPOCK2Q92563 424 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 TMEM168Q9H0V1 697 aa23.8■■□□□ 1.4
RAB40C-209ENST00000565511 CFAP46Q8IYW2 2715 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 MFSD11O43934 449 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 NOBOXO60393 691 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 CPP00450 1065 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 TNFP01375 233 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 GYPCP04921 128 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 ARSEP51690 589 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 ERVPABLB-1P60509 514 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 CXADRP78310 365 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 SKOR1P84550 965 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 PIGHQ14442 188 aaPredicted RBP23.79■■□□□ 1.4
RAB40C-209ENST00000565511 ATP13A4Q4VNC1 1196 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 FOXR1Q6PIV2 292 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 IGF2-ASQ6U949 168 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 HSD11B1LQ7Z5J1 315 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 TSPAN33Q86UF1 283 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 GKN2Q86XP6 184 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 LSMEM2Q8N112 164 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 ATPAF2Q8N5M1 289 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 SYN2Q92777 582 aaPredicted RBP23.79■■□□□ 1.4
RAB40C-209ENST00000565511 SLC46A1Q96NT5 459 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 CPNE5Q9HCH3 593 aa23.79■■□□□ 1.4
RAB40C-209ENST00000565511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-209ENST00000565511 NPIPB15A6NHN6 443 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-209ENST00000565511 CACNB4O00305 520 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-209ENST00000565511 SOCS5O75159 536 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 HEXIM1O94992 359 aaKnown RBP23.78■■□□□ 1.4
RAB40C-209ENST00000565511 FUCA1P04066 466 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 SERPING1P05155 500 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 VIPR1P32241 457 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 UBASH3AP57075 661 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 ZBED6P86452 979 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 SPIDRQ14159 915 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 DENND2CQ68D51 928 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 PNCKQ6P2M8 343 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 RFLNAQ6ZTI6 216 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 CBARPQ8N350 705 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-209ENST00000565511 LRRN4Q8WUT4 740 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 NUS1Q96E22 293 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 FOXP3Q9BZS1 431 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 WDR26Q9H7D7 661 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 CYP4F12Q9HCS2 524 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 CAPN11Q9UMQ6 739 aa23.78■■□□□ 1.4
RAB40C-209ENST00000565511 AHCTF1Q8WYP5 2266 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 ATMQ13315 3056 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 CDRT15L2A8MXV6 281 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 D6RAR5 112 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 ATXN7O15265 892 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 MAP3K6O95382 1288 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 RPLP0P05388 317 aaKnown RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 HOXC4P09017 264 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 ETV3P41162 512 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 CDH6P55285 790 aa23.77■■□□□ 1.4
RAB40C-209ENST00000565511 POLR2LP62875 67 aaKnown RBP23.77■■□□□ 1.4
RAB40C-209ENST00000565511 FAM71BQ8TC56 605 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms