RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ECHDC3Q96DC8 303 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 SCRN2Q96FV2 425 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 NSMCE3Q96MG7 304 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 SLC46A1Q96NT5 459 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 UBL7Q96S82 380 aaPredicted RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 FUCA2Q9BTY2 467 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 DPH1Q9BZG8 443 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 TMEM168Q9H0V1 697 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 LRRN3Q9H3W5 708 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 PRORYQ9H606 182 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 WDR26Q9H7D7 661 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 PCDH18Q9HCL0 1135 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 NT5MQ9NPB1 228 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 RBM22Q9NW64 420 aaKnown RBP eCLIP6.43□□□□□ -1.38
TCF4-228ENST00000565393 ZNHIT6Q9NWK9 470 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 CTTNBP2NLQ9P2B4 639 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 LRIT1Q9P2V4 623 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.38
TCF4-228ENST00000565393 ENTPD2Q9Y5L3 495 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 GON4LQ3T8J9 2241 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 ASCC3Q8N3C0 2202 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 CCDC187A0A096LP49 1063 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 RHPN2P1A8MT19 583 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 B4DGG1 531 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TMX2-CTNND1H3BSU7 103 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TNFRSF10CO14798 259 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 MATN3O15232 486 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 CASC3O15234 703 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 ZW10O43264 779 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 SOCS5O75159 536 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 HEXIM1O94992 359 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 PEX11BO96011 259 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TPM3P06753 285 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 HOXC4P09017 264 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 H2AFZP0C0S5 128 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 GLB1P16278 677 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 IL4RP24394 825 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 ETV3P41162 512 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 GPR1P46091 355 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 GNPDA1P46926 289 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 PPM1FP49593 454 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 EPHB1P54762 984 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TMPRSS3P57727 454 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 KIAA1024LP59773 190 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TLE3Q04726 772 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TAF1BQ53T94 588 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 ANKRD20A8PQ5CZ79 823 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 RALGPS1Q5JS13 557 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 KCTD16Q68DU8 428 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 OGFOD3Q6PK18 319 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 Q6ZVL8 140 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 USP53Q70EK8 1073 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 USP45Q70EL2 814 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 H2AFVQ71UI9 128 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 RAB11FIP2Q7L804 512 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 HSD11B1LQ7Z5J1 315 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 LRRC49Q8IUZ0 686 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 NIPA2Q8N8Q9 360 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 KYQ8NBH2 561 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 CCL4L1Q8NHW4 92 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 CTNNBL1Q8WYA6 563 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 SLC39A7Q92504 469 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 IQCDQ96DY2 449 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 NUS1Q96E22 293 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 PRR11Q96HE9 360 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 HIC2Q96JB3 615 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 COQ10AQ96MF6 247 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TMEM74Q96NL1 305 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 BBC3Q96PG8 261 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.38
TCF4-228ENST00000565393 SEMA3CQ99985 751 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 MAK16Q9BXY0 300 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 FOXP3Q9BZS1 431 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 STRADBQ9C0K7 418 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 DEF6Q9H4E7 631 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 CARS2Q9HA77 564 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 CPNE5Q9HCH3 593 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 FGF22Q9HCT0 170 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 PHPT1Q9NRX4 125 aaPredicted RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 SPATS2LQ9NUQ6 558 aaKnown RBP6.42□□□□□ -1.38
TCF4-228ENST00000565393 HAUS2Q9NVX0 235 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 KCTD5Q9NXV2 234 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 RABGEF1Q9UJ41 708 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TMEM98Q9Y2Y6 226 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 TTLL3Q9Y4R7 772 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 DGKBQ9Y6T7 804 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 SPTBN2O15020 2390 aa6.42□□□□□ -1.38
TCF4-228ENST00000565393 PLXNA2O75051 1894 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 TRBV23OR9-2A0A075B6M9 112 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 A0A0U1RQS6 177 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 TEX51A0A1B0GUA7 166 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 PRSS38A1L453 326 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 PMS2P1A4D2B8 440 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 PLD2O14939 933 aa6.41□□□□□ -1.38
TCF4-228ENST00000565393 HTRA2O43464 458 aaPredicted RBP6.41□□□□□ -1.38
TCF4-228ENST00000565393 DXOO77932 396 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms