RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CELA2BP08218 269 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CTSEP14091 401 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CR2P20023 1033 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 HNF1BP35680 557 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 YPEL5P62699 121 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 DSC2Q02487 901 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 GALNT2Q10471 571 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CDKN3Q16667 212 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 ODF2Q5BJF6 829 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 LRRC38Q5VT99 294 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CRTC1Q6UUV9 634 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 TMPRSS12Q86WS5 348 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 PQLC3Q8N755 202 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CCDC112Q8NEF3 446 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 BTN2A2Q8WVV5 523 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 SMIM14Q96QK8 99 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 LRRC61Q9BV99 259 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 LACRTQ9GZZ8 138 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 RBM22Q9NW64 420 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 GOLGA6AQ9NYA3 693 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 DOLKQ9UPQ8 538 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 HEY1Q9Y5J3 304 aa13.68□□□□□ -0.22
VPS9D1-204ENST00000565023 SRRM3A6NNA2 597 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 TAF4O00268 1085 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 SPOPO43791 374 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 SOCS5O75159 536 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 GCATO75600 419 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ANXA6P08133 673 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 C1SP09871 688 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ALPIP09923 528 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 TSHRP16473 764 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 COMTP21964 271 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ACP1P24666 158 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 HTR1BP28222 390 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 DYNLT1P63172 113 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 SLC10A2Q12908 348 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 CNGA3Q16281 694 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 C11orf63Q6NUN7 778 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 NPNTQ6UXI9 565 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 B4GALNT4Q76KP1 1039 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 KIAA1328Q86T90 577 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 LRRC8AQ8IWT6 810 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 TPCN2Q8NHX9 752 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 RNF157Q96PX1 679 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 DESI2Q9BSY9 194 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 DUSP23Q9BVJ7 150 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 MAK16Q9BXY0 300 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 GOLPH3Q9H4A6 298 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 SIRPGQ9P1W8 387 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 KLQ9UEF7 1012 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ALG6Q9Y672 507 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 DUSP10Q9Y6W6 482 aa13.67□□□□□ -0.22
VPS9D1-204ENST00000565023 ITPR1Q14643 2758 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 MAST4O15021 2626 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ASXL3Q9C0F0 2248 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 LY6G6EA0A0G2JKS1 128 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 KCNK1O00180 336 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CACNB4O00305 520 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 MATN3O15232 486 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 PGLSO95336 258 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 PDHA1P08559 390 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CYP2A6P11509 494 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 CKMT1AP12532 417 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 VIPR1P32241 457 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 EPHB1P54762 984 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 INSM1Q01101 510 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 MTM1Q13496 603 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 NFATC4Q14934 902 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ALG11Q2TAA5 492 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 KCTD16Q68DU8 428 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 ZCCHC8Q6NZY4 707 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 EFL1Q7Z2Z2 1120 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 TSPAN33Q86UF1 283 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 PELI3Q8N2H9 469 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 IFI44Q8TCB0 444 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
VPS9D1-204ENST00000565023 NUS1Q96E22 293 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms