RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 STMN1P16949 149 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 OGNP20774 298 aaKnown RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 RAB10P61026 200 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 DLG2Q15700 870 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 ACCSLQ4AC99 568 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CARD16Q5EG05 197 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 TCEAL5Q5H9L2 206 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 TRIM68Q6AZZ1 485 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SYCE2Q6PIF2 218 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CNSTQ6PJW8 725 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SDCCAG8Q86SQ7 713 aaPredicted RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 CLEC14AQ86T13 490 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 PLPP6Q8IY26 295 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 TTC30BQ8N4P2 665 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 WFIKKN2Q8TEU8 576 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 ELMO2Q96JJ3 720 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CPEB1Q9BZB8 566 aaKnown RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 THG1LQ9NWX6 298 aaKnown RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 MARCH4Q9P2E8 410 aaPredicted RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 EMCNQ9ULC0 261 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 HEPACAM2A8MVW5 462 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 KLF11O14901 512 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SNX3O60493 162 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 POP4O95707 220 aaKnown RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 S1PR4O95977 384 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CISD3P0C7P0 127 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 COL6A2P12110 1019 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 HOXB8P17481 243 aaPredicted RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 SAT1P21673 171 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 NNMTP40261 264 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 DGKGP49619 791 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 VASPP50552 380 aaPredicted RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 RAD51Q06609 339 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 TMEM215Q68D42 235 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 FAM47EQ6ZV65 393 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SLC41A1Q8IVJ1 513 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 PAF1Q8N7H5 531 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 ANKS4BQ8N8V4 417 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 GPATCH11Q8N954 259 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CCDC63Q8NA47 563 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CCDC197Q8NCU1 140 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 RAB3IL1Q8TBN0 382 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SMIM14Q96QK8 99 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SIRPGQ9P1W8 387 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 SLCO3A1Q9UIG8 710 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 CORO1CQ9ULV4 474 aaPredicted RBP19.6■□□□□ 0.73
CLN6-205ENST00000564846 ERVW-1Q9UQF0 538 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 STARD13Q9Y3M8 1113 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 ZNF711Q9Y462 761 aa19.6■□□□□ 0.73
CLN6-205ENST00000564846 RANBP2P49792 3224 aaKnown RBP19.59■□□□□ 0.73
CLN6-205ENST00000564846 PDE4DIPQ5VU43 2346 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 A0A0J9YYE9 177 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 STX7O15400 261 aaKnown RBP19.59■□□□□ 0.73
CLN6-205ENST00000564846 LINC01565O15544 149 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 EDF1O60869 148 aaKnown RBP19.59■□□□□ 0.73
CLN6-205ENST00000564846 TRBC1P01850 177 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 BPGMP07738 259 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 GKP32189 559 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 SLC12A2P55011 1212 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 GEN1Q17RS7 908 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 MFSD6LQ8IWD5 586 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 ASIC4Q96FT7 647 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 TSNARE1Q96NA8 513 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 C19orf43Q9BQ61 176 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 TMEM216Q9P0N5 145 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 CDH7Q9ULB5 785 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 PHTF1Q9UMS5 762 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 SLC27A6Q9Y2P4 619 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 C2orf16Q68DN1 1984 aa19.59■□□□□ 0.73
CLN6-205ENST00000564846 A0A1W2PQ67 120 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 H7C0S8 307 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 SLC4A1P02730 911 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 PROCP04070 461 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 ASLP04424 464 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 ATP5BP06576 529 aaKnown RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 CCNHP51946 323 aaPredicted RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 ITIH4Q14624 930 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 PDGFRLQ15198 375 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 TYSND1Q2T9J0 566 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 FASTKD1Q53R41 847 aaKnown RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 ZNF789Q5FWF6 425 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 C16orf46Q6P387 395 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 NUDCD3Q8IVD9 361 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 E2F7Q96AV8 911 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 TSPAN17Q96FV3 270 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 ZNF641Q96N77 438 aaPredicted RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 OMDQ99983 421 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 GPR63Q9BZJ6 419 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 SLCO1B3Q9NPD5 702 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 POLR3BQ9NW08 1133 aaPredicted RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.58■□□□□ 0.73
CLN6-205ENST00000564846 SLC8A2Q9UPR5 921 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 ACOT9Q9Y305 439 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 PKP3Q9Y446 797 aa19.58■□□□□ 0.73
CLN6-205ENST00000564846 MYOFQ9NZM1 2061 aa19.58■□□□□ 0.72
CLN6-205ENST00000564846 TRIM24O15164 1050 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 SLC35E2BP0CK96 405 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 CTPS1P17812 591 aa19.57■□□□□ 0.72
CLN6-205ENST00000564846 HMGCLP35914 325 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms