RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZNF648Q5T619 568 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAM171A1Q5VUB5 890 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAM109BQ6ICB4 259 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 METTL2BQ6P1Q9 378 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCNT2Q6UVM3 1135 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 LRIG3Q6UXM1 1119 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RNF19BQ6ZMZ0 732 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 LUZP2Q86TE4 346 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DEPDC4Q8N2C3 294 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RNF175Q8N4F7 328 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ARMC2Q8NEN0 867 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MAML1Q92585 1016 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PBXIP1Q96AQ6 731 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 P2RY11Q96G91 374 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 EBF4Q9BQW3 602 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMBIM4Q9HC24 238 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 INTS9Q9NV88 658 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 COMMD8Q9NX08 183 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 A0A1W2PQH9 124 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SLC15A5A6NIM6 579 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RHPN2P1A8MT19 583 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM127O75204 238 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CRTAMO95727 393 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 NFKB1P19838 968 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 WARSP23381 471 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 MDH1P40925 334 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CDKN2BP42772 138 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GCNT1Q02742 428 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAAP100Q0VG06 881 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 EFEMP1Q12805 493 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DSG2Q14126 1118 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PLEKHG4Q58EX7 1191 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 USP50Q70EL3 339 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 PID1Q7Z2X4 250 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CCDC36Q8IYA8 594 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KIAA1958Q8N8K9 716 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TGS1Q96RS0 853 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ETNK1Q9HBU6 452 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 LRRC4Q9HBW1 653 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAM105AQ9NUU6 356 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM184CQ9NVA4 438 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 HNRNPCL2B2RXH8 293 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ENPP3O14638 875 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SGTAO43765 313 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SHOX2O60902 331 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ZNF3P17036 446 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KDELR1P24390 212 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TRPC1P48995 793 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PSEN2P49810 448 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SERPINH1P50454 418 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CASP9P55211 416 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RAB2AP61019 212 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GRSF1Q12849 480 aaKnown RBP eCLIP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ACOX1Q15067 660 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCNJ8Q15842 424 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C18orf21Q32NC0 220 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 CNPY1Q3B7I2 92 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM31Q5JXX7 168 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FBXO47Q5MNV8 452 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 C15orf39Q6ZRI6 1047 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ARHGAP22Q7Z5H3 698 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CPT1BQ92523 772 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMCO6Q96DC7 493 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ATP6V1G3Q96LB4 118 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FCRL3Q96P31 734 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 SLC22A12Q96S37 553 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CLEC4MQ9H2X3 399 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 ASB7Q9H672 318 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TLE6Q9H808 572 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PCDHB16Q9NRJ7 776 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 FAM32AQ9Y421 112 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 K7ERQ8 282 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ACKR2O00590 384 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCNJ13O60928 360 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CILPO75339 1184 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 IPO13O94829 963 aaKnown RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 NPPAP01160 153 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CSH1P0DML2 217 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CSH2P0DML3 217 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 PRKCIP41743 596 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KCNQ1P51787 676 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ZXDBP98169 803 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KDSRQ06136 332 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 MESP2Q0VG99 397 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ERMARDQ5T6L9 678 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 RAP1GAP2Q684P5 730 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GLB1LQ6UWU2 654 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 KIAA0408Q6ZU52 694 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DNAAF3Q8N9W5 541 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 BTF3L4Q96K17 158 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 SPATA17Q96L03 361 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 HPS4Q9NQG7 708 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 GALPQ9UBC7 116 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 ARIH1Q9Y4X5 557 aaPredicted RBP3.37□□□□□ -1.87
CHD9-213ENST00000564845 IRAK3Q9Y616 596 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 DOCK1Q14185 1865 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMEM191CA6NGB0 347 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 TMCC2O75069 709 aa3.37□□□□□ -1.87
CHD9-213ENST00000564845 CLUP10909 449 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms