RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SLC36A3Q495N2 470 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ABRAXAS1Q6UWZ7 409 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RNF145Q96MT1 663 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DNAI2Q9GZS0 605 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 EPS8L2Q9H6S3 715 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ARPC2O15144 300 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SLC22A2O15244 555 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HBP1O60381 514 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CCNA2P20248 432 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HOXD12P35452 270 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NPY2RP49146 381 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PAFAH1B3Q15102 231 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ANKRD34AQ69YU3 496 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZDHHC17Q8IUH5 632 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OR6P1Q8NGX9 317 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 WNT8BQ93098 351 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TUBGCP3Q96CW5 907 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RHOBTB2Q9BYZ6 727 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OR12D3Q9UGF7 316 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DAPK2Q9UIK4 370 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NUDT5Q9UKK9 219 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MCM3APO60318 1980 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZBBXA8MT70 800 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TOMM70O94826 608 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IST1P53990 364 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DIO3P55073 304 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TRAP1Q12931 704 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MAPK11Q15759 364 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RALGPS2Q86X27 583 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GLT1D1Q96MS3 346 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BRD8Q9H0E9 1235 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SMARCAD1Q9H4L7 1026 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PLEKHA5Q9HAU0 1116 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CD151P48509 253 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BTG3Q14201 252 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 INPP5AQ14642 412 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NAPEPLDQ6IQ20 393 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TMEM53Q6P2H8 277 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PKN3Q6P5Z2 889 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SLC35B4Q969S0 331 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 POLE4Q9NR33 117 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 VPS51Q9UID3 782 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TIMM22Q9Y584 194 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 A0A1B0GTL3 188 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PTGES3LE9PB15 166 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SYNCRIPO60506 623 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FPGSQ05932 587 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DNASE1L3Q13609 305 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RGS21Q2M5E4 152 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MFSD4BQ5TF39 518 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TNIP2Q8NFZ5 429 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TEKT5Q96M29 485 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MCMBPQ9BTE3 642 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CCDC90BQ9GZT6 254 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TKTL2Q9H0I9 626 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MRPL40Q9NQ50 206 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IGSF5Q9NSI5 407 aa20.54■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PGS1Q32NB8 556 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PDCD4Q53EL6 469 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CYBRD1Q53TN4 286 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GPRIN1Q7Z2K8 1008 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IGFN1Q86VF2 1251 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MTMR14Q8NCE2 650 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PPP1R14BQ96C90 147 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NPY6RQ99463 290 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HERC2P3Q9BVR0 1158 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FSD1LQ9BXM9 530 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 AGPAT4Q9NRZ5 378 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 STAP1Q9ULZ2 295 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 LRIG2O94898 1065 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RAD23AP54725 363 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SPIDRQ14159 915 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FBXO47Q5MNV8 452 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ITIH5Q86UX2 942 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PCYOX1LQ8NBM8 494 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TAMM41Q96BW9 452 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 C19orf60Q96EN9 201 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CSF3RQ99062 836 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MID1IP1Q9NPA3 183 aa20.53■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZNF487B1APH4 448 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 H0YJX3 145 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PIP5K1BO14986 540 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ACOX3O15254 700 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 EEF1DP29692 281 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RPS9P46781 194 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MAXP61244 160 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ITKQ08881 620 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FRG1Q14331 258 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 UGT3A2Q3SY77 523 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 C9orf57Q5W0N0 161 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OSTM1Q86WC4 334 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ERO1BQ86YB8 467 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CHST13Q8NET6 341 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SNX19Q92543 992 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ESAMQ96AP7 390 aa20.52■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SPATC1LQ9H0A9 340 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms