RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 RFTN1Q14699 578 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FAM26DQ5JW98 314 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 ZNF549Q6P9A3 640 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 CFAP52Q8N1V2 620 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 AFAP1L2Q8N4X5 818 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 OR9I1Q8NGQ6 314 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 SEPT5Q99719 369 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FBRSL1Q9HCM7 1045 aaKnown RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 NMRK2Q9NPI5 230 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 TRAF6Q9Y4K3 522 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 GREB1Q4ZG55 1949 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FBP2O00757 339 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 TRPA1O75762 1119 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 BCAS2O75934 225 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 WISP3O95389 354 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 RALGDSQ12967 914 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 SERINC3Q13530 473 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FAM171A1Q5VUB5 890 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 REP15Q6BDI9 236 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 SLC24A5Q71RS6 500 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FAR2Q96K12 515 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 FAM193BQ96PV7 902 aaPredicted RBP22.4■■□□□ 1.18
SPSB3-206ENST00000564709 PKP2Q99959 881 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 PCDHAC1Q9H158 963 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 CCSER2Q9H7U1 834 aa22.4■■□□□ 1.18
SPSB3-206ENST00000564709 LOC285095A0A1B0GVY8 99 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 E7ENX8 843 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 PSMD12O00232 456 aaPredicted RBP22.39■■□□□ 1.17
SPSB3-206ENST00000564709 ACOT8O14734 319 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 SLC10A3P09131 477 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 IL10RBQ08334 325 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 SQLEQ14534 574 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 TLR1Q15399 786 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 ZNF678Q5SXM1 525 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 NADSYN1Q6IA69 706 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 LAYNQ6UX15 382 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 ST13P4Q8IZP2 240 aaPredicted RBP22.39■■□□□ 1.17
SPSB3-206ENST00000564709 ZNF483Q8TF39 744 aaPredicted RBP22.39■■□□□ 1.17
SPSB3-206ENST00000564709 TADA1Q96BN2 335 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 LRRC14BA6NHZ5 514 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 GPC4O75487 556 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 SNUPNO95149 360 aaKnown RBP22.39■■□□□ 1.17
SPSB3-206ENST00000564709 FESP07332 822 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 IMPDH1P20839 514 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 GRIA2P42262 883 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 POLE2P56282 527 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 NKX3-2P78367 333 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 ZNF235Q14590 738 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 MGAT5BQ3V5L5 792 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 RARS2Q5T160 578 aaKnown RBP22.39■■□□□ 1.17
SPSB3-206ENST00000564709 CYHR1Q6ZMK1 362 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 SLC22A9Q8IVM8 553 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 FATE1Q969F0 183 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 CACNA2D2Q9NY47 1150 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 HCSTQ9UBK5 93 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 PTGDR2Q9Y5Y4 395 aa22.39■■□□□ 1.17
SPSB3-206ENST00000564709 CCDC162PA2VCL2 907 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 TRIM38O00635 465 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 UNC50Q53HI1 259 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 FAM45BPQ6NSW5 357 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 ZFP1Q6P2D0 407 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 PAOXQ6QHF9 649 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 FAM45AQ8TCE6 357 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 C3orf30Q96M34 536 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 POLR1EQ9GZS1 481 aaKnown RBP22.38■■□□□ 1.17
SPSB3-206ENST00000564709 PCDHGB4Q9UN71 923 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 PCDHGB5Q9Y5G0 923 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 AK5Q9Y6K8 562 aa22.38■■□□□ 1.17
SPSB3-206ENST00000564709 PPP6CO00743 305 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 CD3EAPO15446 510 aaKnown RBP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 SIX3O95343 332 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 GLP2RO95838 553 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 TIAL1Q01085 375 aaKnown RBP eCLIP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 UGT2A3Q6UWM9 527 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 BTBD9Q96Q07 612 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 GPR62Q9BZJ7 368 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 POLR3BQ9NW08 1133 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 GIMAP2Q9UG22 337 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 C15orf38-AP3S2A0A0A6YYH1 394 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 A0A0D9SEW6 157 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 TMEM189-UBE2V1I3L0A0 370 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 AHCYL1O43865 530 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 EOMESO95936 686 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 CD1DP15813 335 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 FDXRP22570 491 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 KCNQ1P51787 676 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 ARPINQ7Z6K5 226 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 GALNT7Q86SF2 657 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 TLR8Q9NR97 1041 aaKnown RBP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 PAPOLBQ9NRJ5 636 aaKnown RBP22.37■■□□□ 1.17
SPSB3-206ENST00000564709 BCAP29Q9UHQ4 241 aa22.37■■□□□ 1.17
SPSB3-206ENST00000564709 DRGXA6NNA5 263 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 UBXN8O00124 270 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 GATMP50440 423 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 NME5P56597 212 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 LRP8Q14114 963 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 OR4D1Q15615 310 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 PARP15Q460N3 678 aa22.36■■□□□ 1.17
SPSB3-206ENST00000564709 RSPO2Q6UXX9 243 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms