RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	HID1	Q8IV36	788 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	SGTB	Q96EQ0	304 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	C1GALT1C1	Q96EU7	318 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288		K7EPI3	171 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	NR4A1	P22736	598 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	MXD4	Q14582	209 aa	Predicted RBP	4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	PLA2G4F	Q68DD2	849 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	CHSY3	Q70JA7	882 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	DNAJC19	Q96DA6	116 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHGB6	Q9Y5F9	930 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	WASH4P	A8MWX3	477 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	TRIM3	O75382	744 aa	Predicted RBP	4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	RPLP0	P05388	317 aa	Known RBP	4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	NUDT7	P0C024	238 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	AGAP6	Q5VW22	663 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF746	Q6NUN9	644 aa	Predicted RBP	4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	OR7G3	Q8NG95	312 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	OR6P1	Q8NGX9	317 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	AGAP4	Q96P64	663 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	IL1RL2	Q9HB29	575 aa		4.27	□□□□□ -1.73
MACF1-231	ENST00000564288	RIMBP2	O15034	1052 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DGAT1	O75907	488 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CSTF2	P33240	577 aa	Known RBP eCLIP	4.26	□□□□□ -1.73	6e-6	■■■□□ 17
MACF1-231	ENST00000564288	FOXM1	Q08050	763 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ADGRF4	Q8IZF3	695 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CDYL2	Q8N8U2	506 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CIB1	Q99828	191 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MYOM1	P52179	1685 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	WRB	O00258	174 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHGA12	O60330	932 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GH1	P01241	217 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	TFAM	Q00059	246 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	UBE2R2	Q712K3	238 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ANKRA2	Q9H9E1	313 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	EXD2	Q9NVH0	621 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CCDC167	Q9P0B6	97 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	LDOC1	O95751	146 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CALCA	P01258	141 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	PEX2	P28328	305 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF667	Q5HYK9	610 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CLVS2	Q5SYC1	327 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MRNIP	Q6NTE8	343 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ERMP1	Q7Z2K6	904 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CYP4Z2P	Q8N1L4	340 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF606	Q8WXB4	792 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ADAM33	Q9BZ11	813 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DMAC2	Q9NW81	257 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NYAP2	Q9P242	653 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SUPT7L	O94864	414 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DNAJB13	P59910	316 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	PRKCD	Q05655	676 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	INO80D	Q53TQ3	878 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MINDY1	Q8N5J2	469 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	IL22	Q9GZX6	179 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GGA1	Q9UJY5	639 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	IGSF9B	Q9UPX0	1349 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MYO10	Q9HD67	2058 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MYL12B	O14950	172 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NBN	O60934	754 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MYL12A	P19105	171 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CCDC142	Q17RM4	750 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GNAS	Q5JWF2	1037 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	FBXO33	Q7Z6M2	555 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	C12orf71	A8MTZ7	269 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CD36	P16671	472 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SCNN1A	P37088	669 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	PRELP	P51888	382 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	AP1S2	P56377	157 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	HAVCR2	Q8TDQ0	301 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	LRTOMT	Q8WZ04	291 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SMYD2	Q9NRG4	433 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ADGRE2	Q9UHX3	823 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	AGO2	Q9UKV8	859 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288		A0A1B0GVI7	797 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	TESPA1	A2RU30	521 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CD58	P19256	250 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	KLHL22	Q53GT1	634 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	COQ5	Q5HYK3	327 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NDUFAF5	Q5TEU4	345 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NANOGP8	Q6NSW7	305 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ALYREF	Q86V81	257 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SPPL2C	Q8IUH8	684 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM109A	Q8N4B1	249 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GTF2H4	Q92759	462 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NUMBL	Q9Y6R0	609 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	HNRNPDL	O14979	420 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	PLIN3	O60664	434 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	UGT2B17	O75795	530 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ADAMTS2	O95450	1211 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DBT	P11182	482 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	HLA-DMA	P28067	261 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	RBM34	P42696	430 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	UGT2B15	P54855	530 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CCNI	Q14094	377 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SNRNP35	Q16560	246 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SNX20	Q7Z614	316 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	TTLL6	Q8N841	843 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	NXNL1	Q96CM4	212 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DIRAS2	Q96HU8	199 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms