RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KRT7P08729 469 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 CCNB1P14635 433 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 AK4P27144 223 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PON1P27169 355 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ADRA1BP35368 520 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ATP1A2P50993 1020 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 SQSTM1Q13501 440 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 UGP2Q16851 508 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ANKS6Q68DC2 871 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PIM3Q86V86 326 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ZDHHC17Q8IUH5 632 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PYROXD2Q8N2H3 581 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 JOSD2Q8TAC2 188 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ECHDC3Q96DC8 303 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 HMCESQ96FZ2 354 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 C1QTNF7Q9BXJ2 289 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 FRMD8Q9BZ67 464 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 APMAPQ9HDC9 416 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PLEKHM1Q9Y4G2 1056 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PCYT1BQ9Y5K3 369 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ESPL1Q14674 2120 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 ZFHX3Q15911 3703 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 B4E171 279 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 GOLGA8SH3BPF8 625 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 TNFRSF10CO14798 259 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 RAMP2O60895 175 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 RECQL5O94762 991 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 ECEL1O95672 775 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 EML2O95834 649 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 IGSF6O95976 241 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 F9P00740 461 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CEACAM5P06731 702 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 HOXC4P09017 264 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 USP8P40818 1118 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 TSPAN7P41732 249 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 HDAC4P56524 1084 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 NOMO3P69849 1222 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CETN1Q12798 172 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 POLD3Q15054 466 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CCDC14Q49A88 953 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 LACTB2Q53H82 288 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 LIPIQ6XZB0 460 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CAMK1DQ8IU85 385 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 IL22RA1Q8N6P7 574 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 OR4D9Q8NGE8 314 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 SMARCE1Q969G3 411 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 RNF31Q96EP0 1072 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 DPEP2Q9H4A9 486 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CYP4F12Q9HCS2 524 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 METTL5Q9NRN9 209 aaKnown RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 SIDT1Q9NXL6 827 aaKnown RBP10.39□□□□□ -0.75
SF3B3-204ENST00000563739 TAAR2Q9P1P5 351 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 OR12D3Q9UGF7 316 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 ATP8A1Q9Y2Q0 1164 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 KCNMB2Q9Y691 235 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 CELSR1Q9NYQ6 3014 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 PDZD2O15018 2839 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 APCP25054 2843 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 POLQO75417 2590 aa10.39□□□□□ -0.75
SF3B3-204ENST00000563739 SOD1P00441 154 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 POU3F2P20265 443 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 GNLYP22749 145 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 COL8A1P27658 744 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 HTR1BP28222 390 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 RIPPLY3P57055 190 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 RHOAP61586 193 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ATP11AP98196 1134 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ELP6Q0PNE2 266 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 KLRB1Q12918 225 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 PTP4A2Q12974 167 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 TRA2AQ13595 282 aaKnown RBP eCLIP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ARHGEF7Q14155 803 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 CLPPQ16740 277 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 DEFB109BQ30KR1 87 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 INO80DQ53TQ3 878 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 AFMIDQ63HM1 303 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ARCQ7LC44 396 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ARHGAP22Q7Z5H3 698 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 NOP9Q86U38 636 aaKnown RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 TMEM135Q86UB9 458 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 CBARPQ8N350 705 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 RTL3Q8N8U3 475 aaKnown RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 ZDHHC1Q8WTX9 485 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 STARD8Q92502 1023 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 CENPIQ92674 756 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 TBC1D31Q96DN5 1066 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 COQ10AQ96MF6 247 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 CATSPER2Q96P56 530 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 CTRCQ99895 268 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 SUV39H2Q9H5I1 410 aa10.38□□□□□ -0.75
SF3B3-204ENST00000563739 TMEM184BQ9Y519 407 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-204ENST00000563739 C2CD4BA6NLJ0 364 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 EFCAB7A8K855 629 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 RASA4BC9J798 803 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms