RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 CLEC16AQ2KHT3 1053 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 DEFB106AQ8N104 65 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 TP53I13Q8NBR0 393 aaPredicted RBP18.23■□□□□ 0.51
E4F1-203ENST00000563643 RNF214Q8ND24 703 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 AGBL5Q8NDL9 886 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 RBM15Q96T37 977 aaKnown RBP eCLIP18.23■□□□□ 0.51
E4F1-203ENST00000563643 SYT11Q9BT88 431 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 C1QTNF7Q9BXJ2 289 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 SLC39A1Q9NY26 324 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
E4F1-203ENST00000563643 C16orf96A6NNT2 1141 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 B4DGG1 531 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 RHOCP08134 193 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 MAP4P27816 1152 aaKnown RBP18.22■□□□□ 0.51
E4F1-203ENST00000563643 GGCXP38435 758 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 PEX5P50542 639 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 CCNHP51946 323 aaPredicted RBP18.22■□□□□ 0.51
E4F1-203ENST00000563643 SRP54P61011 504 aaKnown RBP18.22■□□□□ 0.51
E4F1-203ENST00000563643 ASIC2Q16515 512 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 CRTC2Q53ET0 693 aaPredicted RBP18.22■□□□□ 0.51
E4F1-203ENST00000563643 DCAF12Q5T6F0 453 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 ENPP7Q6UWV6 458 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 FAM46DQ8NEK8 389 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 ARHGEF26Q96DR7 871 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 TCTN2Q96GX1 697 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 XPO4Q9C0E2 1151 aaKnown RBP18.22■□□□□ 0.51
E4F1-203ENST00000563643 ZDHHC6Q9H6R6 413 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 MAP4K5Q9Y4K4 846 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 AKAP9Q99996 3911 aa18.22■□□□□ 0.51
E4F1-203ENST00000563643 CBFA2T2O43439 604 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 LDLRP01130 860 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 SLC2A3P11169 496 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 HTR1BP28222 390 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 CCR1P32246 355 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 PRKCIP41743 596 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 NSFP46459 744 aaKnown RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 DNA2P51530 1060 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 CDH4P55283 916 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 MRPL49Q13405 166 aaKnown RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 IRF4Q15306 451 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 C2CD6Q53TS8 623 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 FAM102AQ5T9C2 384 aaPredicted RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 E4F1Q66K89 784 aaPredicted RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 ANKS6Q68DC2 871 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 KCTD16Q68DU8 428 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 ARCQ7LC44 396 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 SLC30A5Q8TAD4 765 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 PDXPQ96GD0 296 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 FAM204AQ9H8W3 233 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 SEPT11Q9NVA2 429 aaKnown RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 DDIT4Q9NX09 232 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 RRN3Q9NYV6 651 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 KLQ9UEF7 1012 aa18.21■□□□□ 0.51
E4F1-203ENST00000563643 ERRFI1Q9UJM3 462 aaPredicted RBP18.21■□□□□ 0.51
E4F1-203ENST00000563643 A0A0D9SEW6 157 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 FAM170AA1A519 330 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 TMEM110-MUSTN1A8MSY1 372 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 TCP11X1B4DZS4 312 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 MMP20O60882 483 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 TM7SF2O76062 418 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 PDGFAP04085 211 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 CSTF2P33240 577 aaKnown RBP eCLIP18.2■□□□□ 0.5
E4F1-203ENST00000563643 OR1D5P58170 312 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 RAB15P59190 212 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 PTP4A2Q12974 167 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 TRA2AQ13595 282 aaKnown RBP eCLIP18.2■□□□□ 0.5
E4F1-203ENST00000563643 NFATC4Q14934 902 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 CLPPQ16740 277 aaPredicted RBP18.2■□□□□ 0.5
E4F1-203ENST00000563643 CARD16Q5EG05 197 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 TAF8Q7Z7C8 310 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 PCDH20Q8N6Y1 951 aaKnown RBP18.2■□□□□ 0.5
E4F1-203ENST00000563643 PRR7Q8TB68 274 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 NT5C3BQ969T7 300 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 C11orf70Q9BRQ4 267 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 SPRY4Q9C004 299 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 CEP44Q9C0F1 390 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 DPEP2Q9H4A9 486 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
E4F1-203ENST00000563643 TMEM59LQ9UK28 342 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 CAPN11Q9UMQ6 739 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 HS3ST4Q9Y661 456 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 SHANK1Q9Y566 2161 aa18.2■□□□□ 0.5
E4F1-203ENST00000563643 SYNJ2BP-COX16A0A087WUM0 186 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 B4E171 279 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 GOLGA8SH3BPF8 625 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 AREL1O15033 823 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 RFPL1O75677 317 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 CALB1P05937 261 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 PRF1P14222 555 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 ALDH4A1P30038 563 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 TSPAN7P41732 249 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 SERPINH1P50454 418 aaKnown RBP18.19■□□□□ 0.5
E4F1-203ENST00000563643 LIMK2P53671 638 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 GSCP56915 257 aaPredicted RBP18.19■□□□□ 0.5
E4F1-203ENST00000563643 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
E4F1-203ENST00000563643 ZBED6P86452 979 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 ABHD18Q0P651 414 aa18.19■□□□□ 0.5
E4F1-203ENST00000563643 ZNF805Q5CZA5 627 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms