RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ELFN1P0C7U0 828 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 FAM87AP0C7U9 286 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 KLK7P49862 253 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 TPI1P60174 286 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 B4GALNT1Q00973 533 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 PHF19Q5T6S3 580 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 TMEM164Q5U3C3 297 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 DNAJC24Q6P3W2 148 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 DPPA4Q7L190 304 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 TMPRSS9Q7Z410 1059 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 VASH2Q86V25 355 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 SFTPA2Q8IWL1 248 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 KIAA1524Q8TCG1 905 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 WDR26Q9H7D7 661 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 AKAP7Q9P0M2 348 aaPredicted RBP18.74■□□□□ 0.59
NME3-204ENST00000563498 NAV2Q8IVL1 2488 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 TLN1Q9Y490 2541 aaKnown RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 ARHGAP42A6NI28 874 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 EIF3CLB5ME19 914 aaKnown RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 EPHB6O15197 1021 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 ZW10O43264 779 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 PALMO75781 387 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 RGRP47804 291 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 MAPK10P53779 464 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 RPL7AP62424 266 aaKnown RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 BCL2L1Q07817 233 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 NSUN2Q08J23 767 aaKnown RBP eCLIP18.73■□□□□ 0.59
NME3-204ENST00000563498 NR1D2Q14995 579 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 TBR1Q16650 682 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 MAP9Q49MG5 647 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 PPP1R15BQ5SWA1 713 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 FKBP15Q5T1M5 1219 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 ZNF438Q7Z4V0 828 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 PIM3Q86V86 326 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 C17orf82Q86X59 251 aaPredicted RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 TSEN2Q8NCE0 465 aaKnown RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 SPOCK2Q92563 424 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 MCEEQ96PE7 176 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 EIF3CQ99613 913 aaKnown RBP18.73■□□□□ 0.59
NME3-204ENST00000563498 LGR4Q9BXB1 951 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 VPS16Q9H269 839 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 SEMA6CQ9H3T2 930 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 CYP4F12Q9HCS2 524 aa18.73■□□□□ 0.59
NME3-204ENST00000563498 PRSS38A1L453 326 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 HGSO14964 777 aaPredicted RBP18.72■□□□□ 0.59
NME3-204ENST00000563498 TPM2P07951 284 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 DESP17661 470 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 GM2AP17900 193 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 PAPOLAP51003 745 aaKnown RBP18.72■□□□□ 0.59
NME3-204ENST00000563498 RFTN1Q14699 578 aaPredicted RBP18.72■□□□□ 0.59
NME3-204ENST00000563498 C16orf72Q14CZ0 275 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 SYCP1Q15431 976 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 CDKAL1Q5VV42 579 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 PNCKQ6P2M8 343 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 CCL4L1Q8NHW4 92 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 ENOX1Q8TC92 643 aaKnown RBP18.72■□□□□ 0.59
NME3-204ENST00000563498 GPBAR1Q8TDU6 330 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 CELF6Q96J87 481 aaKnown RBP18.72■□□□□ 0.59
NME3-204ENST00000563498 TRIM4Q9C037 500 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 SLC39A8Q9C0K1 460 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 SIK3Q9Y2K2 1263 aa18.72■□□□□ 0.59
NME3-204ENST00000563498 STMND1H3BQB6 276 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 TRAFD1O14545 582 aaPredicted RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 B4GAT1O43505 415 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 MYCLP1P12525 358 aaPredicted RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 CCNB1P14635 433 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 WT1P19544 449 aaPredicted RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 KRT31Q15323 416 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 CINPQ9BW66 212 aaPredicted RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 GSDMCQ9BYG8 508 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 RDH14Q9HBH5 336 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 SPATS2LQ9NUQ6 558 aaKnown RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 GEMIN8Q9NWZ8 242 aaKnown RBP18.71■□□□□ 0.59
NME3-204ENST00000563498 KCTD5Q9NXV2 234 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 PCDHGA3Q9Y5H0 932 aa18.71■□□□□ 0.59
NME3-204ENST00000563498 AGRPO00253 132 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 EEF2KO00418 725 aaKnown RBP18.7■□□□□ 0.58
NME3-204ENST00000563498 GPR3P46089 330 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 AP1S1P61966 158 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 NFKB2Q00653 900 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 ILF3Q12906 894 aaKnown RBP eCLIP18.7■□□□□ 0.58
NME3-204ENST00000563498 ACOX1Q15067 660 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 DCUN1D2Q6PH85 259 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 PAF1Q8N7H5 531 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 HTR3CQ8WXA8 447 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 COQ10AQ96MF6 247 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 FUCA2Q9BTY2 467 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 SLC25A18Q9H1K4 315 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 NUP62CLQ9H1M0 184 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 ADNPQ9H2P0 1102 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 TRNAU1APQ9NX07 287 aaKnown RBP18.7■□□□□ 0.58
NME3-204ENST00000563498 MOSPD1Q9UJG1 213 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 AP4E1Q9UPM8 1137 aa18.7■□□□□ 0.58
NME3-204ENST00000563498 RHPN2P1A8MT19 583 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 FGF1P05230 155 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 ATP1A2P50993 1020 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 RENBPP51606 427 aa18.69■□□□□ 0.58
NME3-204ENST00000563498 MAZP56270 477 aaKnown RBP18.69■□□□□ 0.58
NME3-204ENST00000563498 OR1D5P58170 312 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms