RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PSMA2P25787 234 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 ETV5P41161 510 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 HLTFQ14527 1009 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 NCAPHQ15003 741 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 LINC00303Q3SY05 128 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 ERMARDQ5T6L9 678 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 RFX8Q6ZV50 586 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 DPPA4Q7L190 304 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 SPRED1Q7Z699 444 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 TAF8Q7Z7C8 310 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 FAM46DQ8NEK8 389 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 TMEM74Q96NL1 305 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 CINPQ9BW66 212 aaPredicted RBP16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 PISDQ9UG56 409 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 LOXL2Q9Y4K0 774 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 BOD1L1Q8NFC6 3051 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 AHCTF1Q8WYP5 2266 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 B4DGG1 531 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 CACNB4O00305 520 aaPredicted RBP16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 MBD3O95983 291 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 HOXC4P09017 264 aaPredicted RBP16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 PNLIPP16233 465 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 GLB1P16278 677 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 BCL2L1Q07817 233 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 NSUN2Q08J23 767 aaKnown RBP eCLIP16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 C14orf28Q4W4Y0 310 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 SPECC1LQ69YQ0 1117 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 PLEKHA7Q6IQ23 1121 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 CYP4F12Q9HCS2 524 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 WDR70Q9NW82 654 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 LRIT1Q9P2V4 623 aa16.85■□□□□ 0.29
HDGFL3-203ENST00000563404 UNC13CQ8NB66 2214 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PRAMEF33A0A0G2JMD5 474 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 TMEM191CA6NGB0 347 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 DFFAO00273 331 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 TNFRSF10CO14798 259 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PRAMEF10O60809 474 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 FUCA1P04066 466 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 JMJD7P0C870 316 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 FERP16591 822 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 SCNN1BP51168 640 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 B4GALNT1Q00973 533 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 MYL5Q02045 173 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 IL10RBQ08334 325 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PNCKQ6P2M8 343 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 NRROSQ86YC3 692 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 SLITRK4Q8IW52 837 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PTCD2Q8WV60 388 aaKnown RBP16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 SEMA6CQ9H3T2 930 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 SP110Q9HB58 689 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 SPATS2LQ9NUQ6 558 aaKnown RBP16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PARVAQ9NVD7 372 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 DONSONQ9NYP3 566 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 FOXJ2Q9P0K8 574 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 B4GALT6Q9UBX8 382 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 MYO18BQ8IUG5 2567 aa16.84■□□□□ 0.29
HDGFL3-203ENST00000563404 PRSS38A1L453 326 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 TEX33O43247 280 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 DAPK3O43293 454 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 B4GAT1O43505 415 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 PEX11BO96011 259 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 TNFAIP3P21580 790 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 MIPP30301 263 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 SLC10A7Q0GE19 358 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 DPYSQ14117 519 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 RFTN1Q14699 578 aaPredicted RBP16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 ACOX1Q15067 660 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 ZFAND4Q86XD8 727 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 PSKH2Q96QS6 385 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 DPEP2Q9H4A9 486 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 WDR26Q9H7D7 661 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 ST14Q9Y5Y6 855 aa16.83■□□□□ 0.28
HDGFL3-203ENST00000563404 EIF3CLB5ME19 914 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 C9orf172C9J069 976 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 HTRA2O43464 458 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 NUDT21O43809 227 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 LIPCP11150 499 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 WT1P19544 449 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 KELP23276 732 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 MAZP56270 477 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 AP1S1P61966 158 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 POLR2LP62875 67 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 C16orf72Q14CZ0 275 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 PTPRRQ15256 657 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 CNGA3Q16281 694 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 PPP6R3Q5H9R7 873 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 E4F1Q66K89 784 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 VASH2Q86V25 355 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 C17orf82Q86X59 251 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 PGBD5Q8N414 524 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 ANKRD20A12PQ8NF67 263 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 GPBAR1Q8TDU6 330 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 USP7Q93009 1102 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms