RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PAPD7Q5XG87 772 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ANKRD40Q6AI12 368 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ADGRD1Q6QNK2 874 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 OLFML1Q6UWY5 402 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 CEACAM20Q6UY09 585 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 XYLT1Q86Y38 959 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 PPM1KQ8N3J5 372 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 RYBPQ8N488 228 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 TTC13Q8NBP0 860 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ZNF606Q8WXB4 792 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 NT5C3BQ969T7 300 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 MOCOSQ96EN8 888 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 PGAP3Q96FM1 320 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 NT5C1BQ96P26 610 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 CPXM1Q96SM3 734 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 DPYSL5Q9BPU6 564 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ZPBPQ9BS86 351 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 UNKQ9C0B0 810 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 INTS2Q9H0H0 1204 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ACP6Q9NPH0 428 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 SIDT1Q9NXL6 827 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 FAM13BQ9NYF5 915 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 MFHAS1Q9Y4C4 1052 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 SVILO95425 2214 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 TSPAN11A1L157 253 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 PRSS38A1L453 326 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 CETN3O15182 167 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 PMM2O15305 246 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 HNRNPRO43390 633 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 MAP3K6O95382 1288 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 CBX6O95503 412 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 RECKO95980 971 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ZNF28P17035 718 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 AK4P27144 223 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 DLSTP36957 453 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 STAT1P42224 750 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 FMO5P49326 533 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 LIG3P49916 1009 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 RALGDSQ12967 914 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 SMYD5Q6GMV2 418 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 FAM183BPQ6ZVS7 135 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 RRAGAQ7L523 313 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC26A9Q7LBE3 791 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 BNIPLQ7Z465 357 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 KDELC2Q7Z4H8 507 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ZSWIM9Q86XI8 627 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ESX1Q8N693 406 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ZNF397Q8NF99 534 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 HMCESQ96FZ2 354 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 TTYH3Q9C0H2 523 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 WDCPQ9H6R7 721 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 PCDH12Q9NPG4 1184 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 TAAR2Q9P1P5 351 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 RCOR3Q9P2K3 495 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 NEU3Q9UQ49 428 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ENTPD4Q9Y227 616 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC5A6Q9Y289 635 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 PCDHB3Q9Y5E6 796 aa7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 MDC1Q14676 2089 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-206ENST00000563343 ZGRF1Q86YA3 2104 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 CCDC168Q8NDH2 2452 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 NAV3Q8IVL0 2385 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 CACNB4O00305 520 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC16A3O15427 465 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 INSIG1O15503 277 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 TMCC1O94876 653 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 ERBB2P04626 1255 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 MMP12P39900 470 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 SUOXP51687 545 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 GPLD1P80108 840 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 GCNT1Q02742 428 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 ELP6Q0PNE2 266 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 POLD3Q15054 466 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 UGP2Q16851 508 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 TSR1Q2NL82 804 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 CPZQ66K79 652 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 JMJD6Q6NYC1 403 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 LRRC31Q6UY01 552 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 LEKR1Q6ZMV7 388 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 NLRP14Q86W24 1093 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 DRC7Q8IY82 874 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 SMYD4Q8IYR2 804 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 NETO2Q8NC67 525 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 HCAR2Q8TDS4 363 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 C19orf60Q96EN9 201 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 C5orf34Q96MH7 638 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 ZNF396Q96N95 335 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 RANBP9Q96S59 729 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC29A3Q9BZD2 475 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 ZYG11BQ9C0D3 744 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 KCND3Q9UK17 655 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 HPSEQ9Y251 543 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 VPS9D1Q9Y2B5 631 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 PCDHGA6Q9Y5G7 932 aa7.73□□□□□ -1.17
HERPUD1-206ENST00000563343 FER1L5A0AVI2 2057 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms