RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ALG14Q96F25 216 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 TSPAN17Q96FV3 270 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 UBXN10Q96LJ8 280 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 CATSPERZQ9NTU4 200 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 NLE1Q9NVX2 485 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 RAP2CQ9Y3L5 183 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 GYG2O15488 501 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 BAIAP3O94812 1187 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 MT-CO1P00395 513 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CKMP06732 381 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 LTA4HP09960 611 aaKnown RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 NSUN2Q08J23 767 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 LAMB3Q13751 1172 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 ATXN7L2Q5T6C5 722 aaPredicted RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 GPR158Q5T848 1215 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 ZNF783Q6ZMS7 281 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 PDCD6IPQ8WUM4 868 aaKnown RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 ILKAPQ9H0C8 392 aaPredicted RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 POMKQ9H5K3 350 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 TAGLN3Q9UI15 199 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 ZDHHC2Q9UIJ5 367 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 RIMKLBQ9ULI2 386 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 K7ERQ8 282 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CRTAMO95727 393 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 BMP1P13497 986 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 GM2AP17900 193 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 MNAT1P51948 309 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 PRKAA2P54646 552 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CDH18Q13634 790 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 FAM83EQ2M2I3 478 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 MRNIPQ6NTE8 343 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 LILRA6Q6PI73 481 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 NCEH1Q6PIU2 408 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 BBS7Q8IWZ6 715 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 FAM217AQ8IXS0 508 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 APCDD1Q8J025 514 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 TEX9Q8N6V9 391 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CCNYL1Q8N7R7 359 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 MRPS31Q92665 395 aaKnown RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 FAM96AQ9H5X1 160 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CYP4F12Q9HCS2 524 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 IL23AQ9NPF7 189 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 PLK2Q9NYY3 685 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CFAP97Q9P2B7 532 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 MAFFQ9ULX9 164 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 CLEC4EQ9ULY5 219 aa19.15■□□□□ 0.66
SMPD3-203ENST00000563226 ARIH1Q9Y4X5 557 aaPredicted RBP19.15■□□□□ 0.66
SMPD3-203ENST00000563226 A0A1W2PRU2 124 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 B2RBV5 119 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 CXCL14O95715 111 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 LRG1P02750 347 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 C8AP07357 584 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 FDXRP22570 491 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 PFKPQ01813 784 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 CFAP157Q5JU67 520 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 AGAP9Q5VTM2 703 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 FAM45BPQ6NSW5 357 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 FIBCD1Q8N539 461 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 EFHBQ8N7U6 833 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 FAM45AQ8TCE6 357 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 FAM136AQ96C01 138 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 PPP1R36Q96LQ0 422 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 OR52B2Q96RD2 323 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 SMG9Q9H0W8 520 aaKnown RBP19.14■□□□□ 0.65
SMPD3-203ENST00000563226 ASB3Q9Y575 518 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 GBF1Q92538 1859 aa19.14■□□□□ 0.65
SMPD3-203ENST00000563226 MATN2O00339 956 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 CHUKO15111 745 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 AOC1P19801 751 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 ATP5F1P24539 256 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 ABL2P42684 1182 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 RPL14P50914 215 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 KPNA2P52292 529 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 STC1P52823 247 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 HTRA4P83105 476 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 CREMQ03060 361 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 TAF1AQ15573 450 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 TYSND1Q2T9J0 566 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 GPR65Q8IYL9 337 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 RBM15BQ8NDT2 890 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 SLC22A17Q8WUG5 538 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 OSBPL1AQ9BXW6 950 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 DENND2DQ9H6A0 471 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 CXXC1Q9P0U4 656 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 L3MBTL1Q9Y468 752 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 GOLGA8QA0A0J9YX86 632 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 TYW5A2RUC4 315 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 GOLGA8OA6NCC3 632 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 ANKRD66B4E2M5 251 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 E9PBE3 544 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 GOLGA8NF8WBI6 632 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 GRID2O43424 1007 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 KLHL41O60662 606 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 JUNP05412 331 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 OGNP20774 298 aaKnown RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 KCNC1P48547 511 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 CDKN1CP49918 316 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-203ENST00000563226 PLK1P53350 603 aa19.13■□□□□ 0.65
SMPD3-203ENST00000563226 RHOAP61586 193 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms