RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 RANBP10Q6VN20 620 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 ARHGEF18Q6ZSZ5 1173 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 LYSMD3Q7Z3D4 306 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 ZSCAN30Q86W11 494 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 KLHL7Q8IXQ5 586 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 CBARPQ8N350 705 aaPredicted RBP9.82□□□□□ -0.84
CLK3-208ENST00000562626 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
CLK3-208ENST00000562626 MAIP1Q8WWC4 291 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 PIGKQ92643 395 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 RAB7BQ96AH8 199 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 SCRN2Q96FV2 425 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 FEM1CQ96JP0 617 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 KDM4CQ9H3R0 1056 aa9.82□□□□□ -0.84
CLK3-208ENST00000562626 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
CLK3-208ENST00000562626 RIF1Q5UIP0 2472 aaKnown RBP9.82□□□□□ -0.84
CLK3-208ENST00000562626 ZFHX4Q86UP3 3567 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 A0A1W2PPC4 97 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 K7ESM1 405 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 TSPAN6O43657 245 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 STK10O94804 968 aaKnown RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 RHOBTB1O94844 696 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PAK4O96013 591 aaPredicted RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 KRT14P02533 472 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 LMNAP02545 664 aaKnown RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 XPAP23025 273 aaPredicted RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 CD27P26842 260 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 STIP1P31948 543 aaKnown RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 VIPR1P32241 457 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 DEKP35659 375 aaKnown RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 IGFALSP35858 605 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 MPLP40238 635 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 GRIA4P48058 902 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 GEMP55040 296 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PTSQ03393 145 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 SPEM2Q0P670 501 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 MPP3Q13368 585 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PTPRCAPQ14761 206 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 SF3A2Q15428 464 aaKnown RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 SLC1A5Q15758 541 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PARP6Q2NL67 630 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PLA2G2CQ5R387 149 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 ANKRD22Q5VYY1 191 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 DENND2CQ68D51 928 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 KIAA1161Q6NSJ0 714 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 GCNT7Q6ZNI0 430 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 ZNF534Q76KX8 674 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 CYP2U1Q7Z449 544 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 TTC30BQ8N4P2 665 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PAF1Q8N7H5 531 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 TP53I13Q8NBR0 393 aaPredicted RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 PLA2G15Q8NCC3 412 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 ATL2Q8NHH9 583 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 RMDN1Q96DB5 314 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 COQ10AQ96MF6 247 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 MIR1-1HGQ9H1L0 117 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 PCED1AQ9H1Q7 454 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 TM9SF3Q9HD45 589 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 VPS45Q9NRW7 570 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 RXFP3Q9NSD7 469 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 SHOC2Q9UQ13 582 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 KCTD3Q9Y597 815 aa9.81□□□□□ -0.84
CLK3-208ENST00000562626 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
CLK3-208ENST00000562626 A0A1W2PR77 199 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 POM121BA6NF01 834 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 NEMP1O14524 444 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 BUD23O43709 281 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 RECQL5O94762 991 aaPredicted RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 URI1O94763 535 aaPredicted RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 TMEM63AO94886 807 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 AP2A1O95782 977 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 SLC4A1P02730 911 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 TPH1P17752 444 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 CA5AP35218 305 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 ETV3P41162 512 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 CSNK1EP49674 416 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 SUOXP51687 545 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 STC1P52823 247 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 RPL26P61254 145 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 POLR2LP62875 67 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 RPS21P63220 83 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 ELP6Q0PNE2 266 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
CLK3-208ENST00000562626 MTM1Q13496 603 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 SEMA5AQ13591 1074 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 IRF4Q15306 451 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 WSCD2Q2TBF2 565 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 KCTD16Q68DU8 428 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 NEK5Q6P3R8 708 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 Q6ZVL8 140 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 GSTA5Q7RTV2 222 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 TECPR1Q7Z6L1 1165 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 C11orf74Q86VG3 221 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 SYT12Q8IV01 421 aa9.8□□□□□ -0.84
CLK3-208ENST00000562626 CCDC89Q8N998 374 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms