RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CCDC105Q8IYK2 499 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 METTL6Q8TCB7 284 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 HDAC7Q8WUI4 952 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SMARCE1Q969G3 411 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 OTULINQ96BN8 352 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 ZNF419Q96HQ0 510 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 TREX2Q9BQ50 279 aaPredicted RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 SCNM1Q9BWG6 230 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
HERC1-215ENST00000561436 HIPK3Q9H422 1215 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SLC32A1Q9H598 525 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 PLEKHA5Q9HAU0 1116 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 NRIP3Q9NQ35 241 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 RNF146Q9NTX7 359 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TMEM45AQ9NWC5 275 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 TBC1D14Q9P2M4 693 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 LAMP3Q9UQV4 416 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 PCDHGB5Q9Y5G0 923 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SLC4A4Q9Y6R1 1079 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SCINQ9Y6U3 715 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 LTN1O94822 1766 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 SH3TC1Q8TE82 1336 aa3.93□□□□□ -1.78
HERC1-215ENST00000561436 A0A096LPK6 155 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.92□□□□□ -1.78
HERC1-215ENST00000561436 C17orf102A2RUQ5 167 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PI4KAP2A4QPH2 592 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 MMP3P08254 477 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ACADMP11310 421 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PCNAP12004 261 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 BSGP35613 385 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 SLC16A2P36021 539 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 GPR12P47775 334 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 POLD2P49005 469 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ARSFP54793 590 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PRMT2P55345 433 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 RPL7AP62424 266 aaKnown RBP3.92□□□□□ -1.78
HERC1-215ENST00000561436 CFHR1Q03591 330 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ZBTB16Q05516 673 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 KRTAP1-1Q07627 177 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PRKG2Q13237 762 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 MAMLD1Q13495 774 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 VEPH1Q14D04 833 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PGM5Q15124 567 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 TAF11Q15544 211 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 SERTAD4-AS1Q5TG53 156 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PAPD7Q5XG87 772 aaKnown RBP3.92□□□□□ -1.78
HERC1-215ENST00000561436 NAPEPLDQ6IQ20 393 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 KLHL24Q6TFL4 600 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 OLFM4Q6UX06 510 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 B4GALNT4Q76KP1 1039 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PRSS45Q7RTY3 260 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ARMC9Q7Z3E5 817 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 FAM160B2Q86V87 743 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 NGEFQ8N5V2 710 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PRSS3P2Q8NHM4 247 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 GDPD5Q8WTR4 605 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ERO1AQ96HE7 468 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PIMREGQ9BSJ6 248 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 PRKRIP1Q9H875 184 aaPredicted RBP3.92□□□□□ -1.78
HERC1-215ENST00000561436 ATP8A2Q9NTI2 1148 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 KIAA1456Q9P272 454 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 UTS2RQ9UKP6 389 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ABCC4O15439 1325 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 UBN2Q6ZU65 1347 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 MYO3BQ8WXR4 1341 aa3.92□□□□□ -1.78
HERC1-215ENST00000561436 ABCC12Q96J65 1359 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 TUBGCP6Q96RT7 1819 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 KIR2DS5A0A0G2JLQ3 304 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 A0A1W2PPC1 479 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 FSD2A1L4K1 749 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 LRRC53A6NM62 1247 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 YDJCA8MPS7 323 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 C17orf100A8MU93 164 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 FOXO6A8MYZ6 492 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 EIF3CLB5ME19 914 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 KIR2DS3K7RE56 304 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 PSMD14O00487 310 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 TNFSF14O43557 240 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 RNASEH2AO75792 299 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 NEURL1O76050 574 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 GALTP07902 379 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 SLC2A4P14672 509 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 PTPN2P17706 415 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 NFKBIAP25963 317 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 HOXD9P28356 352 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 RFC1P35251 1148 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 PTPN9P43378 593 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 GABRB2P47870 512 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 RPS3AP61247 264 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 RPS8P62241 208 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 ZNF91Q05481 1191 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 DCTN2Q13561 401 aaKnown RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 RUNX2Q13950 521 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 ERV3-1Q14264 604 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 TBCEQ15813 527 aaPredicted RBP3.91□□□□□ -1.78
HERC1-215ENST00000561436 RPE65Q16518 533 aa3.91□□□□□ -1.78
HERC1-215ENST00000561436 CCNG2Q16589 344 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms