RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 DESP17661 470 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 IL1R2P27930 398 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 SLC10A7Q0GE19 358 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 AFMIDQ63HM1 303 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 PLEKHA7Q6IQ23 1121 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 INO80CQ6PI98 192 aaPredicted RBP13.44□□□□□ -0.26
PSME1-208ENST00000561059 LVRNQ6Q4G3 990 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 CCDC81Q6ZN84 652 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 CLEC17AQ6ZS10 378 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 DPPA4Q7L190 304 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 CLEC14AQ86T13 490 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 PTCD2Q8WV60 388 aaKnown RBP13.44□□□□□ -0.26
PSME1-208ENST00000561059 GRAMD1AQ96CP6 724 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
PSME1-208ENST00000561059 DPEP2Q9H4A9 486 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 HAUS4Q9H6D7 363 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 CNOT8Q9UFF9 292 aaKnown RBP13.44□□□□□ -0.26
PSME1-208ENST00000561059 LOXL2Q9Y4K0 774 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
PSME1-208ENST00000561059 ANKRD36A6QL64 1941 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.265e-22■■■■■ 28.9
PSME1-208ENST00000561059 TRAFD1O14545 582 aaPredicted RBP13.43□□□□□ -0.26
PSME1-208ENST00000561059 LRCH4O75427 683 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 JMJD7P0C870 316 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 SKILP12757 684 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 AMPD1P23109 780 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 HTR7P34969 479 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 ETV5P41161 510 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 CSNK1DP48730 415 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 MAZP56270 477 aaKnown RBP13.43□□□□□ -0.26
PSME1-208ENST00000561059 KIAA1024LP59773 190 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 MAXP61244 160 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 TYRO3Q06418 890 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 DPYSQ14117 519 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
PSME1-208ENST00000561059 AGERQ15109 404 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 ASIC2Q16515 512 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 SPECC1LQ69YQ0 1117 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 PGBD5Q8N414 524 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 WDR48Q8TAF3 677 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 HSPH1Q92598 858 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 ZNF653Q96CK0 615 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 SMIM14Q96QK8 99 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 WDR26Q9H7D7 661 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 RDH14Q9HBH5 336 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 LRIT1Q9P2V4 623 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
PSME1-208ENST00000561059 RNF8O76064 485 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 FUCA1P04066 466 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 AK4P27144 223 aaPredicted RBP13.42□□□□□ -0.26
PSME1-208ENST00000561059 ETV3P41162 512 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 MAPK10P53779 464 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 IL10RBQ08334 325 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CNGA3Q16281 694 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 AMZ1Q400G9 498 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 ANO6Q4KMQ2 910 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CERCAMQ5T4B2 595 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 PHF19Q5T6S3 580 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 TXNRD3NBQ6F5E7 133 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 RFLNAQ6ZTI6 216 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 VASH2Q86V25 355 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 ZFAND4Q86XD8 727 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
PSME1-208ENST00000561059 ATL2Q8NHH9 583 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 PATE1Q8WXA2 126 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 NUS1Q96E22 293 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CCDC97Q96F63 343 aaPredicted RBP13.42□□□□□ -0.26
PSME1-208ENST00000561059 BTBD6Q96KE9 485 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CCNL2Q96S94 520 aaPredicted RBP13.42□□□□□ -0.26
PSME1-208ENST00000561059 STRADBQ9C0K7 418 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 SEMA6CQ9H3T2 930 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 ZWILCHQ9H900 591 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 CARS2Q9HA77 564 aaKnown RBP13.42□□□□□ -0.26
PSME1-208ENST00000561059 NOD2Q9HC29 1040 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 SPATS2LQ9NUQ6 558 aaKnown RBP13.42□□□□□ -0.26
PSME1-208ENST00000561059 DONSONQ9NYP3 566 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 LRP4O75096 1905 aa13.42□□□□□ -0.26
PSME1-208ENST00000561059 PRAMEF33A0A0G2JMD5 474 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 PRSS38A1L453 326 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 PRAMEF10O60809 474 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 PEX11BO96011 259 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 GLB1P16278 677 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 CTPS1P17812 591 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 LHCGRP22888 699 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 GNPDA1P46926 289 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 POLD2P49005 469 aa13.41□□□□□ -0.26
PSME1-208ENST00000561059 OR1D5P58170 312 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms