RNA–Protein interactions for RNA: ENST00000560155.5

IPO4-211, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,485 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-211ENST00000560155 FOXB2Q5VYV0 432 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 SNRNP27Q8WVK2 155 aaKnown RBP11.78□□□□□ -0.52
IPO4-211ENST00000560155 DNAJC9Q8WXX5 260 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.78□□□□□ -0.52
IPO4-211ENST00000560155 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 EMCNQ9ULC0 261 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 FIS1Q9Y3D6 152 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
IPO4-211ENST00000560155 EFCAB14O75071 495 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 SUPT3HO75486 399 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 C2P06681 752 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 MAPKAPK2P49137 400 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 BST1Q10588 318 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 LMAN2Q12907 356 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 BNIP1Q12981 228 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 ATG14Q6ZNE5 492 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 C10orf107Q8IVU9 208 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 OR13J1Q8NGT2 312 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.52
IPO4-211ENST00000560155 ABTB1Q969K4 478 aaPredicted RBP11.77□□□□□ -0.52
IPO4-211ENST00000560155 TRMT2BQ96GJ1 504 aaKnown RBP11.77□□□□□ -0.52
IPO4-211ENST00000560155 LRRC3Q9BY71 257 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.52
IPO4-211ENST00000560155 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 NUMBLQ9Y6R0 609 aa11.77□□□□□ -0.52
IPO4-211ENST00000560155 TRAV19A0A0A6YYK7 116 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 NEMP2A6NFY4 417 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 SRRM3A6NNA2 597 aaPredicted RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 ERI2A8K979 691 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 ETV4P43268 484 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 NRIP1P48552 1158 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 EPHB1P54762 984 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 NEPROQ6NW34 567 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 LCA5Q86VQ0 697 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 OR4K2Q8NGD2 314 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 CYB5D2Q8WUJ1 264 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 CDK5RAP1Q96SZ6 601 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 KIFC1Q9BW19 673 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 MYLK2Q9H1R3 596 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 TASP1Q9H6P5 420 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 SLCO3A1Q9UIG8 710 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 RAI2Q9Y5P3 530 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 LTBP2Q14767 1821 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 TYW5A2RUC4 315 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 PEX11AO75192 247 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 ALADP13716 330 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 CEBPBP17676 345 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 SLC18A2Q05940 514 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 MESP2Q0VG99 397 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 TRAF2Q12933 501 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 SEMA3AQ14563 771 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 FASTKD1Q53R41 847 aaKnown RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 TCEAL5Q5H9L2 206 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 PSRC1Q6PGN9 363 aaPredicted RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 ARID3BQ8IVW6 561 aaPredicted RBP11.77□□□□□ -0.53
IPO4-211ENST00000560155 ZNF276Q8N554 614 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 MAGEH1Q9H213 219 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 VCXQ9H320 206 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
IPO4-211ENST00000560155 YBEYP58557 167 aaPredicted RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 TAS2R39P59534 338 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 GRIN3AQ8TCU5 1115 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 CPNE1Q99829 537 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 BBS2Q9BXC9 721 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 ARHGEF3Q9NR81 526 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 KLHL14Q9P2G3 628 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 FBXO5Q9UKT4 447 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 INTS6Q9UL03 887 aaKnown RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 FAM95CA0A1B0GW59 222 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 HNRNPRO43390 633 aaKnown RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 KDELR3O43731 214 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 CACNG3O60359 315 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 TSHRP16473 764 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 TSPAN8P19075 237 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 LIMK2P53671 638 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 CSHL1Q14406 222 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 CCDC149Q6ZUS6 474 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 ZC3HC1Q86WB0 502 aaKnown RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 MDGA1Q8NFP4 955 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 NAT9Q9BTE0 207 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
IPO4-211ENST00000560155 SPEGQ15772 3267 aa11.76□□□□□ -0.53
IPO4-211ENST00000560155 CCDC162PA2VCL2 907 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms