RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 P2RY13Q9BPV8 354 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 MGME1Q9BQP7 344 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 WDR83Q9BRX9 315 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 CINPQ9BW66 212 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 FOXQ1Q9C009 403 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SLC6A17Q9H1V8 727 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 GBA3Q9H227 469 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 GLOD4Q9HC38 313 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 C2orf42Q9NWW7 574 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CACNA2D2Q9NY47 1150 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 DEC1Q9P2X7 70 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 FAM153AQ9UHL3 310 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 EVLQ9UI08 416 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 MUTYHQ9UIF7 546 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 NDRG2Q9UN36 371 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ERVW-1Q9UQF0 538 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 DRG1Q9Y295 367 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ANKRD36A6QL64 1941 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 MYO18AQ92614 2054 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 CFAP69A5D8W1 941 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 C5orf60A6NFR6 353 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 DNALI1O14645 258 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 CTIFO43310 598 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 OPHN1O60890 802 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 AVILO75366 819 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PMPCBO75439 489 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 NEBLO76041 1014 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 GAS8O95995 478 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 AGTP01019 485 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PDGFBP01127 241 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 SLC4A1P02730 911 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CTSLP07711 333 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 APRTP07741 180 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CTSBP07858 339 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PIRTP0C851 137 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 SRFP11831 508 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 HNRNPLP14866 589 aaKnown RBP eCLIP5.27□□□□□ -1.57
SPG11-220ENST00000559933 POLR2EP19388 210 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 SCNN1BP51168 640 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CCNHP51946 323 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 PLK1P53350 603 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CRADDP78560 199 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 TRAF2Q12933 501 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 TDGQ13569 410 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 GALNT3Q14435 633 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 KCNJ11Q14654 390 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 DLG2Q15700 870 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 MLF2Q15773 248 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 ACCSLQ4AC99 568 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 C2orf27AQ580R0 203 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FNBP1LQ5T0N5 605 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 RNASEH2BQ5TBB1 312 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 MARC1Q5VT66 337 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 DENND2CQ68D51 928 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 KIAA1211LQ6NV74 962 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ZNF783Q6ZMS7 281 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 BZW1Q7L1Q6 419 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 CCDC25Q86WR0 208 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ZSWIM9Q86XI8 627 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 MPP5Q8N3R9 675 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 RYBPQ8N488 228 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 SH2D3CQ8N5H7 860 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 SLC25A41Q8N5S1 370 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 TEX26Q8N6G2 289 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 NAT8LQ8N9F0 302 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 IPMKQ8NFU5 416 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 OR52K1Q8NGK4 314 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CCDC26Q8TAB7 109 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FBXO25Q8TCJ0 367 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 UBXN4Q92575 508 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PRCCQ92733 491 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 TTC17Q96AE7 1141 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FAM122AQ96E09 287 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 TEKT5Q96M29 485 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ASB2Q96Q27 587 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 SEMA3CQ99985 751 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ERP44Q9BS26 406 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FICDQ9BVA6 458 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PARD6BQ9BYG5 372 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 FRMD8P1Q9BZ68 369 aaPredicted RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 ZDHHC6Q9H6R6 413 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 NOD2Q9HC29 1040 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 CD93Q9NPY3 652 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 HOMER3Q9NSC5 361 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ZDHHC18Q9NUE0 388 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 TMEM51Q9NW97 253 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ELOVL2Q9NXB9 296 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 PAK5Q9P286 719 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 IGSF9Q9P2J2 1179 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 SLC25A13Q9UJS0 675 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 HPCAL4Q9UM19 191 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 NFU1Q9UMS0 254 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 DUSP12Q9UNI6 340 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 SLC27A6Q9Y2P4 619 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 ATP8A1Q9Y2Q0 1164 aa5.27□□□□□ -1.57
SPG11-220ENST00000559933 UTP11Q9Y3A2 253 aaKnown RBP5.27□□□□□ -1.57
SPG11-220ENST00000559933 BPTFQ12830 3046 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms