RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 WWP1Q9H0M0 922 aa17.88■□□□□ 0.45
SNX1-208ENST00000559844 FAM96AQ9H5X1 160 aa17.88■□□□□ 0.45
SNX1-208ENST00000559844 LIMD1Q9UGP4 676 aa17.88■□□□□ 0.45
SNX1-208ENST00000559844 A0A0D9SEW6 157 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 SERPINF2P08697 491 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 ATXN1LP0C7T5 689 aaKnown RBP17.87■□□□□ 0.45
SNX1-208ENST00000559844 RALBP11234 206 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 KCNA4P22459 653 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 GABRB3P28472 473 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 CRABP2P29373 138 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 SLC1A2P43004 574 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 SLC1A6P48664 564 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 RPS24P62847 133 aaKnown RBP17.87■□□□□ 0.45
SNX1-208ENST00000559844 CTBP1Q13363 440 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 CES4AQ5XG92 561 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 ZNF470Q6ECI4 717 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 ZCCHC23Q6ZST2 131 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 CLNKQ7Z7G1 428 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 GALNT7Q86SF2 657 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 WDR75Q8IWA0 830 aaKnown RBP17.87■□□□□ 0.45
SNX1-208ENST00000559844 MFSD6LQ8IWD5 586 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 DENND6AQ8IWF6 608 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 PLD6Q8N2A8 252 aaKnown RBP17.87■□□□□ 0.45
SNX1-208ENST00000559844 OR7D4Q8NG98 312 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 PPP4R1Q8TF05 950 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 PEX13Q92968 403 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 SKA1Q96BD8 255 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 MGME1Q9BQP7 344 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 CINPQ9BW66 212 aaPredicted RBP17.87■□□□□ 0.45
SNX1-208ENST00000559844 NMRAL1Q9HBL8 299 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 ARHGEF3Q9NR81 526 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 STOML2Q9UJZ1 356 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 FBXO5Q9UKT4 447 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 ZNF510Q9Y2H8 683 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 WNT6Q9Y6F9 365 aa17.87■□□□□ 0.45
SNX1-208ENST00000559844 FAM95CA0A1B0GW59 222 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 MROH6A6NGR9 719 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 SLC7A4O43246 635 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 HAUS5O94927 633 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 PSMC3P17980 439 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 CES1P23141 567 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 MPP1Q00013 466 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 DLG2Q15700 870 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 CYB5D1Q6P9G0 228 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 ZNF783Q6ZMS7 281 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 TBC1D1Q86TI0 1168 aaPredicted RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 INPP5DQ92835 1189 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 PSKH2Q96QS6 385 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 SPON2Q9BUD6 331 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 KLC4Q9NSK0 619 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 ZNF358Q9NW07 568 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 THG1LQ9NWX6 298 aaKnown RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 TBC1D14Q9P2M4 693 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 TBC1D30Q9Y2I9 924 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 MYLKQ15746 1914 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 MIA3Q5JRA6 1907 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 F7P08709 466 aaPredicted RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 STMN1P16949 149 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 PRKAA2P54646 552 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 RAB10P61026 200 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 IRF9Q00978 393 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 FCHO2Q0JRZ9 810 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 IHHQ14623 411 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 ADHFE1Q8IWW8 467 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 YAF2Q8IY57 180 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 ZFYVE19Q96K21 471 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 RAB3IPQ96QF0 476 aaPredicted RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 ACE2Q9BYF1 805 aaPredicted RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 LINC00597Q9H2U6 94 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 STN1Q9H668 368 aaKnown RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
SNX1-208ENST00000559844 DUS2Q9NX74 493 aaKnown RBP17.86■□□□□ 0.45
SNX1-208ENST00000559844 LOC730098B7Z3J9 87 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 MUSKO15146 869 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 SERPINB3P29508 390 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 KPNA2P52292 529 aaKnown RBP17.85■□□□□ 0.45
SNX1-208ENST00000559844 POU4F1Q01851 419 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 ZP2Q05996 745 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 SLC41A1Q8IVJ1 513 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 ACVR1CQ8NER5 493 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 PIWIL2Q8TC59 973 aaKnown RBP17.85■□□□□ 0.45
SNX1-208ENST00000559844 OSCP1Q8WVF1 389 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 ASIC4Q96FT7 647 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 ASB2Q96Q27 587 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 LRMDAQ9H2I8 198 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 MFSD1Q9H3U5 465 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 ACOT9Q9Y305 439 aa17.85■□□□□ 0.45
SNX1-208ENST00000559844 A0A087X1B8 175 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TTC24A2A3L6 582 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 TMEM114B3SHH9 223 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 SLC9A3R1O14745 358 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 ASGR2P07307 311 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 SAT1P21673 171 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 CLCN5P51795 746 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 SLC12A2P55011 1212 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 ABCE1P61221 599 aaKnown RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 ELF3P78545 371 aaPredicted RBP17.84■□□□□ 0.45
SNX1-208ENST00000559844 TSNAXIP1Q2TAA8 658 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 FAM91A1Q658Y4 838 aa17.84■□□□□ 0.45
SNX1-208ENST00000559844 TRIM68Q6AZZ1 485 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms