RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ABCG1P45844 678 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 KIAA1024LP59773 190 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 ITKQ08881 620 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 ARMC12Q5T9G4 340 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 TIGD7Q6NT04 549 aaPredicted RBP17.81■□□□□ 0.44
TPM1-218ENST00000559281 PDZD3Q86UT5 571 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 PGBD5Q8N414 524 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 ARL10Q8N8L6 244 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 PLA2G15Q8NCC3 412 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 OR6C4Q8NGE1 309 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 SNIP1Q8TAD8 396 aaKnown RBP17.81■□□□□ 0.44
TPM1-218ENST00000559281 WDR26Q9H7D7 661 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 PCDHB1Q9Y5F3 818 aa17.81■□□□□ 0.44
TPM1-218ENST00000559281 DSPP15924 2871 aaKnown RBP17.8■□□□□ 0.44
TPM1-218ENST00000559281 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 AKR1B10O60218 316 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 TGM2P21980 687 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 VIPR1P32241 457 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 LSSP48449 732 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 MAXP61244 160 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 MMRN1Q13201 1228 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 ARHGEF7Q14155 803 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
TPM1-218ENST00000559281 ISXQ2M1V0 245 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 TBC1D25Q3MII6 688 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 ZFYVE27Q5T4F4 411 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 PNCKQ6P2M8 343 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 RBM44Q6ZP01 1051 aaKnown RBP17.8■□□□□ 0.44
TPM1-218ENST00000559281 USP45Q70EL2 814 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 TEX26Q8N6G2 289 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 FUBP1Q96AE4 644 aaKnown RBP17.8■□□□□ 0.44
TPM1-218ENST00000559281 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 ZNF578Q96N58 590 aaPredicted RBP17.8■□□□□ 0.44
TPM1-218ENST00000559281 RBM15Q96T37 977 aaKnown RBP eCLIP17.8■□□□□ 0.44
TPM1-218ENST00000559281 ZNF670Q9BS34 389 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 POLR1BQ9H9Y6 1135 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 GPR34Q9UPC5 381 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 ZFYVE26Q68DK2 2539 aa17.8■□□□□ 0.44
TPM1-218ENST00000559281 PSMD11O00231 422 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 TLX3O43711 291 aaPredicted RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 CD48P09326 243 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 MX2P20592 715 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 GJC1P36383 396 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 GARSP41250 739 aaKnown RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 ARSEP51690 589 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 GALNT2Q10471 571 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 DPYSL3Q14195 570 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 ANKRD20A8PQ5CZ79 823 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 PCDH19Q8TAB3 1148 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 NUS1Q96E22 293 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 COQ10AQ96MF6 247 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 DNAJC7Q99615 494 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 POLR1EQ9GZS1 481 aaKnown RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 AMACRQ9UHK6 382 aa17.79■□□□□ 0.44
TPM1-218ENST00000559281 TDRD6O60522 2096 aaKnown RBP17.79■□□□□ 0.44
TPM1-218ENST00000559281 TMEM202A6NGA9 273 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 MATN3O15232 486 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 PGLSO95336 258 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 MPOP05164 745 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CELA2BP08218 269 aaPredicted RBP17.78■□□□□ 0.44
TPM1-218ENST00000559281 TMEM253P0C7T8 217 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CCNCP24863 283 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 MAN1A1P33908 653 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 GABREP78334 506 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 TRAF2Q12933 501 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CNGA3Q16281 694 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 ATP13A4Q4VNC1 1196 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 PERM1Q5SV97 790 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 NCBP2-AS2Q69YL0 99 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 TAF8Q7Z7C8 310 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 FATE1Q969F0 183 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CCDC42Q96M95 316 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 TSGA13Q96PP4 275 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 SEMA3CQ99985 751 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CCDC3Q9BQI4 270 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 TSPY26PQ9H489 355 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 PHPT1Q9NRX4 125 aaPredicted RBP17.78■□□□□ 0.44
TPM1-218ENST00000559281 SIRPGQ9P1W8 387 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 MOSPD1Q9UJG1 213 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 PPIL1Q9Y3C6 166 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 RAI2Q9Y5P3 530 aa17.78■□□□□ 0.44
TPM1-218ENST00000559281 CACNA1GO43497 2377 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 DXOO77932 396 aaKnown RBP17.77■□□□□ 0.44
TPM1-218ENST00000559281 CA4P22748 312 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 RBMS1P29558 406 aaKnown RBP17.77■□□□□ 0.44
TPM1-218ENST00000559281 EPHB1P54762 984 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 ERVPABLB-1P60509 514 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 SPIDRQ14159 915 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 ASTE1Q2TB18 679 aaPredicted RBP17.77■□□□□ 0.44
TPM1-218ENST00000559281 CRTC1Q6UUV9 634 aa17.77■□□□□ 0.44
TPM1-218ENST00000559281 CBARPQ8N350 705 aaPredicted RBP17.77■□□□□ 0.44
TPM1-218ENST00000559281 FAM46DQ8NEK8 389 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms