RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 TPCN2Q8NHX9 752 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 SCG3Q8WXD2 468 aaKnown RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 HDAC11Q96DB2 347 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 WDR92Q96MX6 357 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 MCCC1Q96RQ3 725 aaPredicted RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 LRRC61Q9BV99 259 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 BOCQ9BWV1 1114 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 MAK16Q9BXY0 300 aaKnown RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 TCEAL2Q9H3H9 227 aaPredicted RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 DTLQ9NZJ0 730 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 CLCA2Q9UQC9 943 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 DGKBQ9Y6T7 804 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 U3KQA8 63 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 ARID1BQ8NFD5 2236 aaPredicted RBP17.64■□□□□ 0.42
SMAD3-210ENST00000559092 LRRD1A4D1F6 860 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 C3orf70A6NLC5 250 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 CACNB4O00305 520 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 YY2O15391 372 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 FZD6O60353 706 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 LCA5LO95447 670 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 ANXA6P08133 673 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 ALPIP09923 528 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 TSHRP16473 764 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 ZFXP17010 805 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 GM2AP17900 193 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 MAGEA1P43355 309 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 HADHBP55084 474 aaKnown RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 ITKQ08881 620 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 SLC10A2Q12908 348 aaPredicted RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 NR0B2Q15466 257 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 ALG11Q2TAA5 492 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 DEFB133Q30KQ1 61 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 PNCKQ6P2M8 343 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 USP45Q70EL2 814 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 HID1Q8IV36 788 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 RHOT1Q8IXI2 618 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 PLA2G15Q8NCC3 412 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 CCNYQ8ND76 341 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 PIH1D2Q8WWB5 315 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 NRSN2Q9GZP1 204 aa17.64■□□□□ 0.41
SMAD3-210ENST00000559092 DDX56Q9NY93 547 aaKnown RBP17.64■□□□□ 0.41
SMAD3-210ENST00000559092 LAMA5O15230 3695 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 EME2A4GXA9 379 aaPredicted RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 A8MX80 341 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 OPA1O60313 960 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 MT-CO3P00414 261 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CTSEP14091 401 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CA4P22748 312 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 RPL26P61254 145 aaKnown RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CYP4F3Q08477 520 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 C1orf61Q13536 156 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CNGA3Q16281 694 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 C6orf132Q5T0Z8 1188 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 SLC9A4Q6AI14 798 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CCDC13Q8IYE1 715 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 OR56A4Q8NGH8 313 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 MDM1Q8TC05 714 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 TSACCQ96A04 125 aaPredicted RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 FUBP1Q96AE4 644 aaKnown RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CLPBQ9H078 707 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 BRD8Q9H0E9 1235 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 ABCG4Q9H172 646 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 KLQ9UEF7 1012 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 RPL26L1Q9UNX3 145 aaKnown RBP17.63■□□□□ 0.41
SMAD3-210ENST00000559092 KNTC1P50748 2209 aa17.63■□□□□ 0.41
SMAD3-210ENST00000559092 CFAP47Q6ZTR5 3102 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 MAP3K6O95382 1288 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 TNFP01375 233 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 TEAD1P28347 426 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 PPIDQ08752 370 aaKnown RBP17.62■□□□□ 0.41
SMAD3-210ENST00000559092 ARHGEF7Q14155 803 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 RTP5Q14D33 572 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 PDK1Q15118 436 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 CDCP2Q5VXM1 449 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 RAVER1Q8IY67 606 aaKnown RBP17.62■□□□□ 0.41
SMAD3-210ENST00000559092 PLD5Q8N7P1 536 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 ARRDC2Q8TBH0 407 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 IFI44Q8TCB0 444 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 NAT6Q93015 286 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 NXPE2Q96DL1 559 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 NUS1Q96E22 293 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 DTD2Q96FN9 168 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 MRFAP1L1Q96HT8 127 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 RBM15Q96T37 977 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMAD3-210ENST00000559092 WDR26Q9H7D7 661 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 LUC7LQ9NQ29 371 aaKnown RBP17.62■□□□□ 0.41
SMAD3-210ENST00000559092 DNPEPQ9ULA0 475 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 DOLKQ9UPQ8 538 aa17.62■□□□□ 0.41
SMAD3-210ENST00000559092 ANKRD11Q6UB99 2663 aaPredicted RBP17.62■□□□□ 0.41
SMAD3-210ENST00000559092 NPIPB15A6NHN6 443 aaPredicted RBP17.61■□□□□ 0.41
SMAD3-210ENST00000559092 APOL1O14791 398 aa17.61■□□□□ 0.41
SMAD3-210ENST00000559092 PDHA1P08559 390 aa17.61■□□□□ 0.41
SMAD3-210ENST00000559092 MYF5P13349 255 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms