RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 GRM3Q14832 879 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 QPCTQ16769 361 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 TEX44Q53QW1 395 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 ZC3H18Q86VM9 953 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 ZNF567Q8N184 647 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 ACTL9Q8TC94 416 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 SCRN2Q96FV2 425 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 TEKT5Q96M29 485 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 POLR1EQ9GZS1 481 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 OR1A2Q9Y585 309 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 RP1P56715 2156 aa12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 GOLGA4Q13439 2230 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-207ENST00000558936 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 CFAP69A5D8W1 941 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 TMEM202A6NGA9 273 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 F5H423 210 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 AURKAO14965 403 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 SCAMP1O15126 338 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 DFNA5O60443 496 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 PIAS2O75928 621 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 NEBLO76041 1014 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 MX2P20592 715 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 TGM2P21980 687 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 DGKAP23743 735 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 RBL1P28749 1068 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 AKT2P31751 481 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 TRIM23P36406 574 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 ETV3P41162 512 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 CCT8P50990 548 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 SIM1P81133 766 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 OTUD4Q01804 1114 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 OVGP1Q12889 678 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 TRIP6Q15654 476 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 RALGPS1Q5JS13 557 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 ZNF662Q6ZS27 426 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 Q6ZVL8 140 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 DENND6BQ8NEG7 585 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 CXorf40AQ8TE69 158 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 SETD7Q8WTS6 366 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 PDCD6IPQ8WUM4 868 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 GLOD4Q9HC38 313 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 CNOT6Q9ULM6 557 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 PHTF1Q9UMS5 762 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 SPO11Q9Y5K1 396 aa12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 ZFC3H1O60293 1989 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-207ENST00000558936 A6NNZ2 444 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 NEMP1O14524 444 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 FLRT2O43155 660 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 ARHGAP6O43182 974 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CLDN7O95471 211 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CPP00450 1065 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CSF2P04141 144 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CAPNS1P04632 268 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PIRTP0C851 137 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 NFKB1P19838 968 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 VIPR1P32241 457 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 CHRNA4P43681 627 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 NR2C2P49116 596 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 SUOXP51687 545 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 GDF10P55107 478 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 GSDMDP57764 484 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 ITKQ08881 620 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 ELP6Q0PNE2 266 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 KIF5AQ12840 1032 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PDE1CQ14123 709 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 GALNT3Q14435 633 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 SUZ12Q15022 739 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PDK1Q15118 436 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 ARMC12Q5T9G4 340 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 LRRC66Q68CR7 880 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PTAR1Q7Z6K3 402 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 REXO1L1PQ8IX06 675 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 EID2Q8N6I1 236 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 SCAMP4Q969E2 229 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 DTD2Q96FN9 168 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 MRGPRX2Q96LB1 330 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 LYSMD1Q96S90 227 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 APOOQ9BUR5 198 aa12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 MLPHQ9BV36 600 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-207ENST00000558936 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms