RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ZNF318Q5VUA4 2279 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 MTMR11A4FU01 709 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 ZNF503-AS2A6NEH8 195 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 B4E171 279 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 FCHO1O14526 889 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 TSPAN7P41732 249 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 AP3M2P53677 418 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 PNLIPRP1P54315 467 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 AP2B1P63010 937 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 SLC39A12Q504Y0 691 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
MARK3-213ENST00000558611 LIMS2Q7Z4I7 341 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 ADGRF2Q8IZF7 708 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 THEM5Q8N1Q8 247 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 TMIEQ8NEW7 156 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 SPATA18Q8TC71 538 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 MYADMQ96S97 322 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 MESP1Q9BRJ9 268 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 ZCWPW1Q9H0M4 648 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 EPHX3Q9H6B9 360 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 ZBTB26Q9HCK0 441 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
MARK3-213ENST00000558611 GCM1Q9NP62 436 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 MAN1B1Q9UKM7 699 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 YIPF1Q9Y548 306 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 COL4A2P08572 1712 aa10.24□□□□□ -0.77
MARK3-213ENST00000558611 HMX3A6NHT5 357 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 AQP7P3A6NL99 342 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 AKAP3O75969 853 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 AGFG2O95081 481 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 CYP1A1P04798 512 aaPredicted RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 PSMC2P35998 433 aaKnown RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 RAP2BP61225 183 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 VAMP2P63027 116 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 DLG4P78352 724 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 NTHL1P78549 312 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 TSPY1Q01534 308 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 ENPEPQ07075 957 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 TWF1Q12792 350 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 PLD1Q13393 1074 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 TRPC3Q13507 836 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 SOWAHAQ2M3V2 549 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 FAXCQ5TGI0 409 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 CENPPQ6IPU0 288 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 CLEC17AQ6ZS10 378 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 INTS8Q75QN2 995 aaKnown RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 ADSSL1Q8N142 457 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 FITM2Q8N6M3 262 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 TSG101Q99816 390 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 SGPP1Q9BX95 441 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 C1QTNF1Q9BXJ1 281 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.77
MARK3-213ENST00000558611 EPS15L1Q9UBC2 864 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 DNMT3BQ9UBC3 853 aaKnown RBP10.23□□□□□ -0.77
MARK3-213ENST00000558611 HSFX1Q9UBD0 423 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 HESX1Q9UBX0 185 aa10.23□□□□□ -0.77
MARK3-213ENST00000558611 PSMA7O14818 248 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 IKBKBO14920 756 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 CETN3O15182 167 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 COQ9O75208 318 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 VNN1O95497 513 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 RHOP08100 348 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 PTPN2P17706 415 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 WARSP23381 471 aaKnown RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 SLC5A2P31639 672 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ATICP31939 592 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 PPP1R2P41236 205 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 LHX1P48742 406 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 VAMP7P51809 220 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 GP2P55259 537 aaKnown RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 MYL6P60660 151 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 TNNC1P63316 161 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 MYL7Q01449 175 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 LRRC63Q05C16 580 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 STIM1Q13586 685 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 C1orf220Q5T0J3 134 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ISM2Q6H9L7 571 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 C4orf50Q6ZRC1 276 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ZC3H3Q8IXZ2 948 aaKnown RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 TMEFF1Q8IYR6 380 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 DCP1BQ8IZD4 617 aaKnown RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 ELMOD1Q8N336 334 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 TTC9BQ8N6N2 239 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ATAD1Q8NBU5 361 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 OR1N1Q8NGS0 311 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ITFG1Q8TB96 612 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 SPPL2BQ8TCT7 592 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 C2orf15Q8WU43 125 aaKnown RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 SYAP1Q96A49 352 aaPredicted RBP10.22□□□□□ -0.77
MARK3-213ENST00000558611 KLHL32Q96NJ5 620 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 DIRC2Q96SL1 478 aa10.22□□□□□ -0.77
MARK3-213ENST00000558611 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms