RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 CASC4Q6P4E1 433 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 USP30Q70CQ3 517 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 TSPAN33Q86UF1 283 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 KBTBD6Q86V97 674 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 RASSF3Q86WH2 238 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 MPP5Q8N3R9 675 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 OR14C36Q8NHC7 312 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 RUBCNQ92622 972 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 RAB7BQ96AH8 199 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
CUX1-216ENST00000558469 PARD6BQ9BYG5 372 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 GPR63Q9BZJ6 419 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 IL22Q9GZX6 179 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 MAGEE1Q9HCI5 957 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 CD93Q9NPY3 652 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 ITM2CQ9NQX7 267 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 SYBUQ9NX95 663 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 B4GALT6Q9UBX8 382 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 MTRF1LQ9UGC7 380 aaKnown RBP9.64□□□□□ -0.87
CUX1-216ENST00000558469 GGT7Q9UJ14 662 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 ITM2BQ9Y287 266 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 PLXNB3Q9ULL4 1909 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 BPTFQ12830 3046 aa9.64□□□□□ -0.87
CUX1-216ENST00000558469 C1orf232A0A0U1RR37 186 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 CCDC78A2IDD5 438 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 K7ESF4 209 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 AURKAO14965 403 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SPINT1O43278 529 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 LAMTOR5O43504 91 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 PLRG1O43660 514 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 PCDH8O95206 1070 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 PAPSS2O95340 614 aaPredicted RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 CLDN7O95471 211 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 CRTAMO95727 393 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SLC4A1P02730 911 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 MYBL2P10244 700 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 ADRA1DP25100 572 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 MCM3P25205 808 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 TNFRSF8P28908 595 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 VIPR1P32241 457 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 MMP12P39900 470 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 MAGEA3P43357 314 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SUOXP51687 545 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 TAS2R38P59533 333 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 VSNL1P62760 191 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 ARHGEF7Q14155 803 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 TAF1AQ15573 450 aaPredicted RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 DNAJC21Q5F1R6 531 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 WDR93Q6P2C0 686 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 TSSK4Q6SA08 328 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 CRTC1Q6UUV9 634 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 CENPUQ71F23 418 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 DPPA4Q7L190 304 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 LYSMD3Q7Z3D4 306 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 GLT6D1Q7Z4J2 308 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 ANKMY2Q8IV38 441 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 C1orf210Q8IVY1 113 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 GSPT2Q8IYD1 628 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 PPHLN1Q8NEY8 458 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 BRSK1Q8TDC3 778 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 PTCD2Q8WV60 388 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 RLN3Q8WXF3 142 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SIGLEC10Q96LC7 697 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 LYSMD1Q96S90 227 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SRPK1Q96SB4 655 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 FMO2Q99518 471 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 WRAP53Q9BUR4 548 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SAYSD1Q9NPB0 183 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■□ 23.3
CUX1-216ENST00000558469 HACD3Q9P035 362 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 SAMD15Q9P1V8 674 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 USP36Q9P275 1121 aaKnown RBP9.63□□□□□ -0.87
CUX1-216ENST00000558469 FZD4Q9ULV1 537 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 CYP8B1Q9UNU6 501 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 ZNF711Q9Y462 761 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 FADS3Q9Y5Q0 445 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 ARL5AQ9Y689 179 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 MAD1L1Q9Y6D9 718 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 ZDBF2Q9HCK1 2354 aa9.63□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3DA0A087WVF3 549 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3IA0A087WXS9 549 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3EA0A087X179 549 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3KA0A087X1G2 549 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 HEATR9A2RTY3 570 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3FA6NER0 549 aaPredicted RBP9.62□□□□□ -0.87
CUX1-216ENST00000558469 PRR23AA6NEV1 266 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 FAM47DPA6NHR8 397 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 GOLGA8CPA6NN73 597 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 C2orf81A6NN90 581 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 TBC1D3LB9A6J9 549 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 AREL1O15033 823 aa9.62□□□□□ -0.87
CUX1-216ENST00000558469 AXIN1O15169 862 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms