RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 R3HDM2Q9Y2K5 976 aaKnown RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 PPIL1Q9Y3C6 166 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ENC1O14682 589 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 PMPCBO75439 489 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF189O75820 626 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 RECQL5O94762 991 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 HNF1BP35680 557 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 IGFALSP35858 605 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ID4P47928 161 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 RPL26P61254 145 aaKnown RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 CDK18Q07002 472 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 LRRC14Q15048 493 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ACOX1Q15067 660 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 IRF4Q15306 451 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 SLC14A2Q15849 920 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF423Q2M1K9 1284 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ITPRIPL1Q6GPH6 555 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 Q6ZSR6 202 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 TSPAN33Q86UF1 283 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ATG4AQ8WYN0 398 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 TADA1Q96BN2 335 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 CENPTQ96BT3 561 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 IFT43Q96FT9 208 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 SMIM14Q96QK8 99 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 FCRL5Q96RD9 977 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 DLL3Q9NYJ7 618 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 FAM153AQ9UHL3 310 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 PYCARDQ9ULZ3 195 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 RPL26L1Q9UNX3 145 aaKnown RBP12.39□□□□□ -0.43
SMAD3-205ENST00000558428 JRKLQ9Y4A0 524 aa12.39□□□□□ -0.43
SMAD3-205ENST00000558428 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CAPN8A6NHC0 703 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 USP27XA6NNY8 438 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 ANKRD66B4E2M5 251 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 KIF5CO60282 957 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CEP104O60308 925 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 DFNA5O60443 496 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 PCCBP05166 539 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 GM2AP17900 193 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 LHCGRP22888 699 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 MSNP26038 577 aaKnown RBP12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CXCR5P32302 372 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 RABIFP47224 123 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CCT8P50990 548 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 GALNT3Q14435 633 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMAD3-205ENST00000558428 AGERQ15109 404 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 QPCTQ16769 361 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 WSCD2Q2TBF2 565 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 ANKRD20A2Q5SQ80 823 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 ANKRD20A1Q5TYW2 823 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 ANKRD20A3Q5VUR7 823 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 LRRC66Q68CR7 880 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CRTC1Q6UUV9 634 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
SMAD3-205ENST00000558428 OXR1Q8N573 874 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 SLC35B2Q8TB61 432 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 CCDC110Q8TBZ0 833 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 NUS1Q96E22 293 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 SPATA13Q96N96 652 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 TRIB3Q96RU7 358 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 MLPHQ9BV36 600 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-205ENST00000558428 GBA3Q9H227 469 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
SMAD3-205ENST00000558428 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 PSMD11O00231 422 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 ANXA9O76027 345 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 NDST3O95803 873 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 FGGP02679 453 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF883P0CG24 379 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF30P17039 623 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 PSMB4P28070 264 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 TNNT3P45378 269 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-205ENST00000558428 ARRB1P49407 418 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-205ENST00000558428 GEMP55040 296 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 WNT3AP56704 352 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 PFN3P60673 137 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 IL9RQ01113 521 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 SLC14A1Q13336 389 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 MPP3Q13368 585 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 PDE1CQ14123 709 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-205ENST00000558428 CCDC70Q6NSX1 233 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 KDELC1Q6UW63 502 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 HSD11B1LQ7Z5J1 315 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 SLC22A18ASQ8N1D0 253 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 FAM71DQ8N9W8 422 aa12.37□□□□□ -0.43
SMAD3-205ENST00000558428 MAIP1Q8WWC4 291 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms