RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 BLOC1S5Q8TDH9 187 aa21.32■■□□□ 1
CASC4-204ENST00000557945 CPT1BQ92523 772 aa21.32■■□□□ 1
CASC4-204ENST00000557945 BIRC7Q96CA5 298 aa21.32■■□□□ 1
CASC4-204ENST00000557945 MAGEE1Q9HCI5 957 aa21.32■■□□□ 1
CASC4-204ENST00000557945 SHOC2Q9UQ13 582 aa21.32■■□□□ 1
CASC4-204ENST00000557945 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.32■■□□□ 1
CASC4-204ENST00000557945 SPO11Q9Y5K1 396 aa21.32■■□□□ 1
CASC4-204ENST00000557945 C1orf232A0A0U1RR37 186 aa21.31■■□□□ 1
CASC4-204ENST00000557945 TCRBV7S3A2A0A539 114 aa21.31■■□□□ 1
CASC4-204ENST00000557945 GOLGA8CPA6NN73 597 aa21.31■■□□□ 1
CASC4-204ENST00000557945 EFCAB8A8MWE9 144 aa21.31■■□□□ 1
CASC4-204ENST00000557945 LZTS3O60299 673 aaPredicted RBP21.31■■□□□ 1
CASC4-204ENST00000557945 HEXIM1O94992 359 aaKnown RBP21.31■■□□□ 1
CASC4-204ENST00000557945 SLC4A1P02730 911 aa21.31■■□□□ 1
CASC4-204ENST00000557945 TPSB2P20231 275 aa21.31■■□□□ 1
CASC4-204ENST00000557945 SGCGQ13326 291 aa21.31■■□□□ 1
CASC4-204ENST00000557945 TPSAB1Q15661 275 aa21.31■■□□□ 1
CASC4-204ENST00000557945 CNGA3Q16281 694 aa21.31■■□□□ 1
CASC4-204ENST00000557945 ZNF284Q2VY69 593 aa21.31■■□□□ 1
CASC4-204ENST00000557945 IZUMO3Q5VZ72 239 aa21.31■■□□□ 1
CASC4-204ENST00000557945 DENND5AQ6IQ26 1287 aa21.31■■□□□ 1
CASC4-204ENST00000557945 C8orf74Q6P047 294 aa21.31■■□□□ 1
CASC4-204ENST00000557945 LIPIQ6XZB0 460 aa21.31■■□□□ 1
CASC4-204ENST00000557945 SLC41A1Q8IVJ1 513 aa21.31■■□□□ 1
CASC4-204ENST00000557945 LYSMD1Q96S90 227 aa21.31■■□□□ 1
CASC4-204ENST00000557945 SRPK1Q96SB4 655 aaKnown RBP21.31■■□□□ 1
CASC4-204ENST00000557945 GPR63Q9BZJ6 419 aa21.31■■□□□ 1
CASC4-204ENST00000557945 ARNT2Q9HBZ2 717 aa21.31■■□□□ 1
CASC4-204ENST00000557945 RAB23Q9ULC3 237 aa21.31■■□□□ 1
CASC4-204ENST00000557945 TPX2Q9ULW0 747 aaKnown RBP21.31■■□□□ 1
CASC4-204ENST00000557945 COQ6Q9Y2Z9 468 aa21.31■■□□□ 1
CASC4-204ENST00000557945 ZNF711Q9Y462 761 aa21.31■■□□□ 1
CASC4-204ENST00000557945 DNALI1O14645 258 aaPredicted RBP21.3■■□□□ 1
CASC4-204ENST00000557945 TM7SF2O76062 418 aa21.3■■□□□ 1
CASC4-204ENST00000557945 CLDN7O95471 211 aa21.3■■□□□ 1
CASC4-204ENST00000557945 IGHV4-34P06331 123 aa21.3■■□□□ 1
CASC4-204ENST00000557945 C6P13671 934 aa21.3■■□□□ 1
CASC4-204ENST00000557945 TPH1P17752 444 aa21.3■■□□□ 1
CASC4-204ENST00000557945 GRIA1P42261 906 aa21.3■■□□□ 1
CASC4-204ENST00000557945 PTGER3P43115 390 aa21.3■■□□□ 1
CASC4-204ENST00000557945 CDK16Q00536 496 aa21.3■■□□□ 1
CASC4-204ENST00000557945 KCNJ11Q14654 390 aa21.3■■□□□ 1
CASC4-204ENST00000557945 ACOX1Q15067 660 aa21.3■■□□□ 1
CASC4-204ENST00000557945 TMEM259Q4ZIN3 620 aa21.3■■□□□ 1
CASC4-204ENST00000557945 SPDYCQ5MJ68 293 aa21.3■■□□□ 1
CASC4-204ENST00000557945 ANKRD22Q5VYY1 191 aa21.3■■□□□ 1
CASC4-204ENST00000557945 LYSMD4Q5XG99 296 aa21.3■■□□□ 1
CASC4-204ENST00000557945 LYSMD3Q7Z3D4 306 aa21.3■■□□□ 1
CASC4-204ENST00000557945 PPIL6Q8IXY8 311 aa21.3■■□□□ 1
CASC4-204ENST00000557945 RGL4Q8IZJ4 473 aa21.3■■□□□ 1
CASC4-204ENST00000557945 MMGT1Q8N4V1 131 aa21.3■■□□□ 1
CASC4-204ENST00000557945 NOA1Q8NC60 698 aaKnown RBP21.3■■□□□ 1
CASC4-204ENST00000557945 ZC3H10Q96K80 434 aaKnown RBP21.3■■□□□ 1
CASC4-204ENST00000557945 SLC17A9Q9BYT1 436 aa21.3■■□□□ 1
CASC4-204ENST00000557945 L2HGDHQ9H9P8 463 aa21.3■■□□□ 1
CASC4-204ENST00000557945 FAM86C1Q9NVL1 165 aa21.3■■□□□ 1
CASC4-204ENST00000557945 SLC31A1O15431 190 aa21.29■■□□□ 1
CASC4-204ENST00000557945 PAK4O96013 591 aaPredicted RBP21.29■■□□□ 1
CASC4-204ENST00000557945 ZNF30P17039 623 aa21.29■■□□□ 1
CASC4-204ENST00000557945 MAOBP27338 520 aa21.29■■□□□ 1
CASC4-204ENST00000557945 MAGEA6P43360 314 aa21.29■■□□□ 1
CASC4-204ENST00000557945 SARNPP82979 210 aaKnown RBP21.29■■□□□ 1
CASC4-204ENST00000557945 CDH17Q12864 832 aa21.29■■□□□ 1
CASC4-204ENST00000557945 SETMARQ53H47 684 aaPredicted RBP21.29■■□□□ 1
CASC4-204ENST00000557945 GLT6D1Q7Z4J2 308 aa21.29■■□□□ 1
CASC4-204ENST00000557945 PCGF5Q86SE9 256 aa21.29■■□□□ 1
CASC4-204ENST00000557945 ERP44Q9BS26 406 aa21.29■■□□□ 1
CASC4-204ENST00000557945 LRRC1Q9BTT6 524 aa21.29■■□□□ 1
CASC4-204ENST00000557945 C1QTNF2Q9BXJ5 285 aa21.29■■□□□ 1
CASC4-204ENST00000557945 MIR1-1HGQ9H1L0 117 aa21.29■■□□□ 1
CASC4-204ENST00000557945 DPH5Q9H2P9 285 aa21.29■■□□□ 1
CASC4-204ENST00000557945 ZFYVE1Q9HBF4 777 aa21.29■■□□□ 1
CASC4-204ENST00000557945 CASS4Q9NQ75 786 aa21.29■■□□□ 1
CASC4-204ENST00000557945 HACD3Q9P035 362 aa21.29■■□□□ 1
CASC4-204ENST00000557945 SNX24Q9Y343 169 aa21.29■■□□□ 1
CASC4-204ENST00000557945 UTP11Q9Y3A2 253 aaKnown RBP21.29■■□□□ 1
CASC4-204ENST00000557945 THADAQ6YHU6 1953 aa21.29■■□□□ 1
CASC4-204ENST00000557945 GOLGA8MH3BSY2 632 aa21.28■■□□□ 1
CASC4-204ENST00000557945 LATO43561 262 aa21.28■■□□□ 1
CASC4-204ENST00000557945 PTSQ03393 145 aa21.28■■□□□ 1
CASC4-204ENST00000557945 FGL2Q14314 439 aa21.28■■□□□ 1
CASC4-204ENST00000557945 CDKN3Q16667 212 aa21.28■■□□□ 1
CASC4-204ENST00000557945 WDR45BQ5MNZ6 344 aa21.28■■□□□ 1
CASC4-204ENST00000557945 RNASEH2BQ5TBB1 312 aaKnown RBP21.28■■□□□ 1
CASC4-204ENST00000557945 HSD11B1LQ7Z5J1 315 aa21.28■■□□□ 1
CASC4-204ENST00000557945 SDK1Q7Z5N4 2213 aa21.28■■□□□ 1
CASC4-204ENST00000557945 NAT8LQ8N9F0 302 aa21.28■■□□□ 1
CASC4-204ENST00000557945 SNF8Q96H20 258 aa21.28■■□□□ 1
CASC4-204ENST00000557945 MYOCQ99972 504 aa21.28■■□□□ 1
CASC4-204ENST00000557945 RAB17Q9H0T7 212 aa21.28■■□□□ 1
CASC4-204ENST00000557945 EPC1Q9H2F5 836 aa21.28■■□□□ 1
CASC4-204ENST00000557945 TRABDQ9H4I3 376 aa21.28■■□□□ 1
CASC4-204ENST00000557945 EIF2B4Q9UI10 523 aaKnown RBP21.28■■□□□ 1
CASC4-204ENST00000557945 TRPM6Q9BX84 2022 aa21.28■■□□□ 1
CASC4-204ENST00000557945 C10orf142B7Z368 130 aa21.27■■□□□ 1
CASC4-204ENST00000557945 PSMD11O00231 422 aa21.27■■□□□ 1
CASC4-204ENST00000557945 AURKAO14965 403 aa21.27■■□□□ 1
CASC4-204ENST00000557945 RECQL5O94762 991 aaPredicted RBP21.27■■□□□ 1
CASC4-204ENST00000557945 TMEM63AO94886 807 aa21.27■■□□□ 1
CASC4-204ENST00000557945 C1SP09871 688 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms